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Fundamentals of Computational Neuroscience

Fundamentals of Computational Neuroscience
Author: Thomas Trappenberg
Publisher: Oxford University Press
Total Pages: 417
Release: 2010
Genre: Mathematics
ISBN: 0199568413

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The new edition of Fundamentals of Computational Neuroscience build on the success and strengths of the first edition. Completely redesigned and revised, it introduces the theoretical foundations of neuroscience with a focus on the nature of information processing in the brain.


Computational Systems Neurobiology

Computational Systems Neurobiology
Author: N. Le Novère
Publisher: Springer Science & Business Media
Total Pages: 569
Release: 2012-07-20
Genre: Medical
ISBN: 9400738587

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Computational neurosciences and systems biology are among the main domains of life science research where mathematical modeling made a difference. This book introduces the many different types of computational studies one can develop to study neuronal systems. It is aimed at undergraduate students starting their research in computational neurobiology or more senior researchers who would like, or need, to move towards computational approaches. Based on their specific project, the readers would then move to one of the more specialized excellent textbooks available in the field. The first part of the book deals with molecular systems biology. Functional genomics is introduced through examples of transcriptomics and proteomics studies of neurobiological interest. Quantitative modelling of biochemical systems is presented in homogeneous compartments and using spatial descriptions. A second part deals with the various approaches to model single neuron physiology, and naturally moves to neuronal networks. A division is focused on the development of neurons and neuronal systems and the book closes on a series of methodological chapters. From the molecules to the organ, thinking at the level of systems is transforming biology and its impact on society. This book will help the reader to hop on the train directly in the tank engine.


The Computational Neurobiology of Reaching and Pointing

The Computational Neurobiology of Reaching and Pointing
Author: Reza Shadmehr
Publisher: MIT Press
Total Pages: 608
Release: 2004-10-28
Genre: Medical
ISBN: 9780262195089

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An introduction to the computational biology of reaching and pointing, with an emphasis on motor learning. Neuroscience involves the study of the nervous system, and its topics range from genetics to inferential reasoning. At its heart, however, lies a search for understanding how the environment affects the nervous system and how the nervous system, in turn, empowers us to interact with and alter our environment. This empowerment requires motor learning. The Computational Neurobiology of Reaching and Pointing addresses the neural mechanisms of one important form of motor learning. The authors integrate material from the computational, behavioral, and neural sciences of motor control that is not available in any other single source. The result is a unified, comprehensive model of reaching and pointing. The book is intended to be used as a text by graduate students in both neuroscience and bioengineering and as a reference source by experts in neuroscience, robotics, and other disciplines. The book begins with an overview of the evolution, anatomy, and physiology of the motor system, including the mechanisms for generating force and maintaining limb stability. The sections that follow, "Computing Locations and Displacements", "Skills, Adaptations, and Trajectories", and "Predictions, Decisions, and Flexibility", present a theory of sensorially guided reaching and pointing that evolves organically based on computational principles rather than a traditional structure-by-structure approach. The book also includes five appendixes that provide brief refreshers on fundamentals of biology, mathematics, physics, and neurophysiology, as well as a glossary of relevant terms. The authors have also made supplemental materials available on the Internet. These web documents provide source code for simulations, step-by-step derivations of certain mathematical formulations, and expanded explanations of some concepts.


The Computational Brain, 25th Anniversary Edition

The Computational Brain, 25th Anniversary Edition
Author: Patricia S. Churchland
Publisher: MIT Press
Total Pages: 569
Release: 2016-11-04
Genre: Science
ISBN: 0262533391

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An anniversary edition of the classic work that influenced a generation of neuroscientists and cognitive neuroscientists. Before The Computational Brain was published in 1992, conceptual frameworks for brain function were based on the behavior of single neurons, applied globally. In The Computational Brain, Patricia Churchland and Terrence Sejnowski developed a different conceptual framework, based on large populations of neurons. They did this by showing that patterns of activities among the units in trained artificial neural network models had properties that resembled those recorded from populations of neurons recorded one at a time. It is one of the first books to bring together computational concepts and behavioral data within a neurobiological framework. Aimed at a broad audience of neuroscientists, computer scientists, cognitive scientists, and philosophers, The Computational Brain is written for both expert and novice. This anniversary edition offers a new preface by the authors that puts the book in the context of current research. This approach influenced a generation of researchers. Even today, when neuroscientists can routinely record from hundreds of neurons using optics rather than electricity, and the 2013 White House BRAIN initiative heralded a new era in innovative neurotechnologies, the main message of The Computational Brain is still relevant.


Biophysics of Computation

Biophysics of Computation
Author: Christof Koch
Publisher: Oxford University Press
Total Pages: 587
Release: 2004-10-28
Genre: Medical
ISBN: 0195181999

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Neural network research often builds on the fiction that neurons are simple linear threshold units, completely neglecting the highly dynamic and complex nature of synapses, dendrites, and voltage-dependent ionic currents. Biophysics of Computation: Information Processing in Single Neurons challenges this notion, using richly detailed experimental and theoretical findings from cellular biophysics to explain the repertoire of computational functions available to single neurons. The author shows how individual nerve cells can multiply, integrate, or delay synaptic inputs and how information can be encoded in the voltage across the membrane, in the intracellular calcium concentration, or in the timing of individual spikes.Key topics covered include the linear cable equation; cable theory as applied to passive dendritic trees and dendritic spines; chemical and electrical synapses and how to treat them from a computational point of view; nonlinear interactions of synaptic input in passive and active dendritic trees; the Hodgkin-Huxley model of action potential generation and propagation; phase space analysis; linking stochastic ionic channels to membrane-dependent currents; calcium and potassium currents and their role in information processing; the role of diffusion, buffering and binding of calcium, and other messenger systems in information processing and storage; short- and long-term models of synaptic plasticity; simplified models of single cells; stochastic aspects of neuronal firing; the nature of the neuronal code; and unconventional models of sub-cellular computation.Biophysics of Computation: Information Processing in Single Neurons serves as an ideal text for advanced undergraduate and graduate courses in cellular biophysics, computational neuroscience, and neural networks, and will appeal to students and professionals in neuroscience, electrical and computer engineering, and physics.


Neural Engineering

Neural Engineering
Author: Chris Eliasmith
Publisher: MIT Press
Total Pages: 384
Release: 2003
Genre: Bioinformatics
ISBN: 9780262550604

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A synthesis of current approaches to adapting engineering tools to the study of neurobiological systems.


The Neurobiology of Computation

The Neurobiology of Computation
Author: James M. Bower
Publisher: Springer Science & Business Media
Total Pages: 448
Release: 2012-12-06
Genre: Computers
ISBN: 1461522358

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This volume includes papers presented at the Third Annual Computation and Neural Systems meeting (CNS*94) held in Monterey California, July 21 - July 26, 1994. This collection includes 71 of the more than 100 papers presented at this year's meeting. Acceptance for meeting presentation was based on the peer review of preliminary papers by at least two referees. The papers in this volume were submitted in final form after the meeting. As represented by this volume, CNS meetings continue to expand in quality, size and breadth of focus as increasing numbers of neuroscientists are taking a computational approach to understanding nervous system function. The CNS meetings are intended to showcase the best of current research in computational neuroscience. As such the meeting is fundamentally focused on understanding the relationship between the structure of neIVOUS systems and their function. What is clear from the continued expansion of the CNS meetings is that computational approaches are increasingly being applied at all levels of neurobiological analysis. in an ever growing number of experimental preparations. and neural subsystems. Thus. experimental subjects range from crickets to primates; sensory systems range from vision to electroreception; experimental approaches range from realistic models of ion channels to the analysis of the information content of spike trains. For this reason, the eNS meetings represent an opportunity for computational neurobiologists to consider their research results in a much broader context than is usually possible.


Nonlinear Dynamics in Computational Neuroscience

Nonlinear Dynamics in Computational Neuroscience
Author: Fernando Corinto
Publisher: Springer
Total Pages: 141
Release: 2018-06-19
Genre: Technology & Engineering
ISBN: 3319710486

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This book provides an essential overview of computational neuroscience. It addresses a broad range of aspects, from physiology to nonlinear dynamical approaches to understanding neural computation, and from the simulation of brain circuits to the development of engineering devices and platforms for neuromorphic computation. Written by leading experts in such diverse fields as neuroscience, physics, psychology, neural engineering, cognitive science and applied mathematics, the book reflects the remarkable advances that have been made in the field of computational neuroscience, an emerging discipline devoted to the study of brain functions in terms of the information-processing properties of the structures forming the nervous system. The contents build on the workshop “Nonlinear Dynamics in Computational Neuroscience: from Physics and Biology to ICT,” which was held in Torino, Italy in September 2015.


Neuronal Dynamics

Neuronal Dynamics
Author: Wulfram Gerstner
Publisher: Cambridge University Press
Total Pages: 591
Release: 2014-07-24
Genre: Computers
ISBN: 1107060834

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This solid introduction uses the principles of physics and the tools of mathematics to approach fundamental questions of neuroscience.