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The Comparative Method in Evolutionary Biology

The Comparative Method in Evolutionary Biology
Author: Paul H. Harvey
Publisher:
Total Pages: 262
Release: 1998
Genre: Science
ISBN:

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From Darwin onward, it has been second nature for evolutionary biologists to think comparatively, because comparisons establish the generality of evolutionary phenomena. Do large genomes slow down development? What lifestyles select for large brains? Are extinction rates related to body size? These are all questions for the comparative method, and this book is about how such questions can be answered. It examines how the comparative method complements other approaches, identifies the biological causes of similarity among species, and discusses methods for reconstructing phylogenetic trees, along with many other topics. The book will interest all students, professionals, and researchers in evolutionary biology, ecology, genetics and related fields.


Modern Phylogenetic Comparative Methods and Their Application in Evolutionary Biology

Modern Phylogenetic Comparative Methods and Their Application in Evolutionary Biology
Author: László Zsolt Garamszegi
Publisher: Springer
Total Pages: 552
Release: 2014-07-29
Genre: Science
ISBN: 3662435500

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Phylogenetic comparative approaches are powerful analytical tools for making evolutionary inferences from interspecific data and phylogenies. The phylogenetic toolkit available to evolutionary biologists is currently growing at an incredible speed, but most methodological papers are published in the specialized statistical literature and many are incomprehensible for the user community. This textbook provides an overview of several newly developed phylogenetic comparative methods that allow to investigate a broad array of questions on how phenotypic characters evolve along the branches of phylogeny and how such mechanisms shape complex animal communities and interspecific interactions. The individual chapters were written by the leading experts in the field and using a language that is accessible for practicing evolutionary biologists. The authors carefully explain the philosophy behind different methodologies and provide pointers – mostly using a dynamically developing online interface – on how these methods can be implemented in practice. These “conceptual” and “practical” materials are essential for expanding the qualification of both students and scientists, but also offer a valuable resource for educators. Another value of the book are the accompanying online resources (available at: http://www.mpcm-evolution.com), where the authors post and permanently update practical materials to help embed methods into practice.


The Comparative Approach in Evolutionary Anthropology and Biology

The Comparative Approach in Evolutionary Anthropology and Biology
Author: Charles L. Nunn
Publisher: University of Chicago Press
Total Pages: 392
Release: 2011-11-30
Genre: Science
ISBN: 0226608980

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And when new fossils are found, such as those of the tiny humans of Flores, scientists compare these remains to other fossils and contemporary humans.


Phylogenetic Comparative Methods in R

Phylogenetic Comparative Methods in R
Author: Liam J. Revell
Publisher: Princeton University Press
Total Pages: 441
Release: 2022-07-12
Genre: Science
ISBN: 0691219044

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An authoritative introduction to the latest comparative methods in evolutionary biology Phylogenetic comparative methods are a suite of statistical approaches that enable biologists to analyze and better understand the evolutionary tree of life, and shed vital new light on patterns of divergence and common ancestry among all species on Earth. This textbook shows how to carry out phylogenetic comparative analyses in the R statistical computing environment. Liam Revell and Luke Harmon provide an incisive conceptual overview of each method along with worked examples using real data and challenge problems that encourage students to learn by doing. By working through this book, students will gain a solid foundation in these methods and develop the skills they need to interpret patterns in the tree of life. Covers every major method of modern phylogenetic comparative analysis in R Explains the basics of R and discusses topics such as trait evolution, diversification, trait-dependent diversification, biogeography, and visualization Features a wealth of exercises and challenge problems Serves as an invaluable resource for students and researchers, with applications in ecology, evolution, anthropology, disease transmission, conservation biology, and a host of other areas Written by two of today’s leading developers of phylogenetic comparative methods


Biological Evolution and Statistical Physics

Biological Evolution and Statistical Physics
Author: M. Lässig
Publisher: Springer
Total Pages: 340
Release: 2008-01-11
Genre: Science
ISBN: 3540456929

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This set of lecture notes gives a first coherent account of a novel aspect of the living world that can be called biological information. The book presents both a pedagogical and state-of-the art roadmap of this rapidly evolving area and covers the whole field, from information which is encoded in the molecular genetic code to the description of large-scale evolution of complex species networks. The book will prove useful for all those who work at the interface of biology, physics and information science.


Phylogenetic Comparative Methods in R

Phylogenetic Comparative Methods in R
Author: Liam J. Revell
Publisher: Princeton University Press
Total Pages: 440
Release: 2022-09-06
Genre: Science
ISBN: 0691219036

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An authoritative introduction to the latest comparative methods in evolutionary biology Phylogenetic comparative methods are a suite of statistical approaches that enable biologists to analyze and better understand the evolutionary tree of life, and shed vital new light on patterns of divergence and common ancestry among all species on Earth. This textbook shows how to carry out phylogenetic comparative analyses in the R statistical computing environment. Liam Revell and Luke Harmon provide an incisive conceptual overview of each method along with worked examples using real data and challenge problems that encourage students to learn by doing. By working through this book, students will gain a solid foundation in these methods and develop the skills they need to interpret patterns in the tree of life. Covers every major method of modern phylogenetic comparative analysis in RExplains the basics of R and discusses topics such as trait evolution, diversification, trait-dependent diversification, biogeography, and visualizationFeatures a wealth of exercises and challenge problemsServes as an invaluable resource for students and researchers, with applications in ecology, evolution, anthropology, disease transmission, conservation biology, and a host of other areasWritten by two of today’s leading developers of phylogenetic comparative methods


Phylogenies and the Comparative Method in Animal Behavior

Phylogenies and the Comparative Method in Animal Behavior
Author: Emília P. Martins
Publisher: Oxford University Press, USA
Total Pages: 429
Release: 1996
Genre: Animal behavior
ISBN: 0195092104

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In the last ten years, the "comparative method" has been revolutionized by modern statistical ways of incorporating phylogenies into the design and analysis of comparative studies. The results of this revolution are particularly important in the study of animal behavior, which has relied on interspecific comparisons to infer universal trends and evolutionary patterns. The chapters of this edited volume consider the impact of modern phylogenetic comparative methods on the study of animal behavior and discuss the main issues that need to be considered in design and analysis of a comparative study, considers possible differences between the evolution of behavior and the evolution of morphology, and reviews how phylogenetic comparative studies have been used in certain areas of behavioral research.


Experimental Evolution

Experimental Evolution
Author: Theodore Garland
Publisher: Univ of California Press
Total Pages: 750
Release: 2009-12-03
Genre: Science
ISBN: 052094447X

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Experimental approaches to evolution provide indisputable evidence of evolution by directly observing the process at work. Experimental evolution deliberately duplicates evolutionary processes—forcing life histories to evolve, producing adaptations to stressful environmental conditions, and generating lineage splitting to create incipient species. This unique volume summarizes studies in experimental evolution, outlining current techniques and applications, and presenting the field’s full range of research—from selection in the laboratory to the manipulation of populations in the wild. It provides work on such key biological problems as the evolution of Darwinian fitness, sexual reproduction, life history, athletic performance, and learning.


The Comparative Approach in Evolutionary Anthropology and Biology

The Comparative Approach in Evolutionary Anthropology and Biology
Author: Charles L. Nunn
Publisher: University of Chicago Press
Total Pages: 392
Release: 2011-07-05
Genre: Science
ISBN: 0226090000

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Comparison is fundamental to evolutionary anthropology. When scientists study chimpanzee cognition, for example, they compare chimp performance on cognitive tasks to the performance of human children on the same tasks. And when new fossils are found, such as those of the tiny humans of Flores, scientists compare these remains to other fossils and contemporary humans. Comparison provides a way to draw general inferences about the evolution of traits and therefore has long been the cornerstone of efforts to understand biological and cultural diversity. Individual studies of fossilized remains, living species, or human populations are the essential units of analysis in a comparative study; bringing these elements into a broader comparative framework allows the puzzle pieces to fall into place, creating a means of testing adaptive hypotheses and generating new ones. With this book, Charles L. Nunn intends to ensure that evolutionary anthropologists and organismal biologists have the tools to realize the potential of comparative research. Nunn provides a wide-ranging investigation of the comparative foundations of evolutionary anthropology in past and present research, including studies of animal behavior, biodiversity, linguistic evolution, allometry, and cross-cultural variation. He also points the way to the future, exploring the new phylogeny-based comparative approaches and offering a how-to manual for scientists who wish to incorporate these new methods into their research.