Statistical Mechanics Theory And Molecular Simulation PDF Download

Are you looking for read ebook online? Search for your book and save it on your Kindle device, PC, phones or tablets. Download Statistical Mechanics Theory And Molecular Simulation PDF full book. Access full book title Statistical Mechanics Theory And Molecular Simulation.

Statistical Mechanics: Theory and Molecular Simulation

Statistical Mechanics: Theory and Molecular Simulation
Author: Mark Tuckerman
Publisher: OUP Oxford
Total Pages: 719
Release: 2010-02-11
Genre: Science
ISBN: 0191523461

Download Statistical Mechanics: Theory and Molecular Simulation Book in PDF, ePub and Kindle

Complex systems that bridge the traditional disciplines of physics, chemistry, biology, and materials science can be studied at an unprecedented level of detail using increasingly sophisticated theoretical methodology and high-speed computers. The aim of this book is to prepare burgeoning users and developers to become active participants in this exciting and rapidly advancing research area by uniting for the first time, in one monograph, the basic concepts of equilibrium and time-dependent statistical mechanics with the modern techniques used to solve the complex problems that arise in real-world applications. The book contains a detailed review of classical and quantum mechanics, in-depth discussions of the most commonly used ensembles simultaneously with modern computational techniques such as molecular dynamics and Monte Carlo, and important topics including free-energy calculations, linear-response theory, harmonic baths and the generalized Langevin equation, critical phenomena, and advanced conformational sampling methods. Burgeoning users and developers are thus provided firm grounding to become active participants in this exciting and rapidly advancing research area, while experienced practitioners will find the book to be a useful reference tool for the field.


Statistical Mechanics: Theory and Molecular Simulation

Statistical Mechanics: Theory and Molecular Simulation
Author: Mark E. Tuckerman
Publisher: Oxford University Press
Total Pages: 881
Release: 2023
Genre: Statistical mechanics
ISBN: 0198825560

Download Statistical Mechanics: Theory and Molecular Simulation Book in PDF, ePub and Kindle

"Complex problems that cross traditional disciplinary lines between physics, chemistry, biology, and materials science can be studied at an unprecedented level of detail using increasingly sophisticated theoretical methodology and high-speed computing platforms. The tools of statistical mechanics provide the bridge between the atomistic descriptions of these complex systems and the macroscopic observables accessible to experimental investigations and predictable in computer simulations. The aim of this book is to prepare burgeoning users and developers to become active researchers in the theoretical and computational molecular sciences by uniting, in one monograph, the theoretical underpinnings of equilibrium and time-dependent classical and quantum statistical mechanics with modern computational techniques used to put these concepts into practice to address real-world applications. The book contains detailed reviews of classical and quantum mechanics and in-depth discussions of the most commonly used statistical ensembles side by side with modern computational methods such as molecular dynamics, Monte Carlo, advanced configurational and trajectory sampling approaches, free-energy based rare-event sampling approaches, Feynman path integral techniques, linear response theory and time correlation functions, stochastic methods, critical phenomena, and an introduction to machine learning and its uses in statistical mechanics. Readers of this book will be provided, in a pedagogical manner, with a firm foundation in both the theory and practical implementation of statistical mechanical concepts, thus allowing them to approach application technology with an understanding of the underlying algorithms and to become, themselves, creators of new and powerful approaches for solving challenging research problems"--


Statistical Mechanics

Statistical Mechanics
Author: Mark Edward Tuckerman
Publisher:
Total Pages: 0
Release: 2010
Genre: Statistical mechanics
ISBN:

Download Statistical Mechanics Book in PDF, ePub and Kindle

This work contains a detailed review of classical and quantum mechanics, in-depth discussions of the most commonly used ensembles simultaneously with modern computational techniques such as molecular dynamics. It also covers important topics such as free-energy calculations, linear-response theory and critical phenomena.


Understanding Molecular Simulation

Understanding Molecular Simulation
Author: Daan Frenkel
Publisher: Elsevier
Total Pages: 664
Release: 2001-10-19
Genre: Science
ISBN: 9780080519982

Download Understanding Molecular Simulation Book in PDF, ePub and Kindle

Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the "recipes" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique for a given application. A wide variety of tools exist, so the choice of technique requires a good understanding of the basic principles. More importantly, such understanding may greatly improve the efficiency of a simulation program. The implementation of simulation methods is illustrated in pseudocodes and their practical use in the case studies used in the text. Since the first edition only five years ago, the simulation world has changed significantly -- current techniques have matured and new ones have appeared. This new edition deals with these new developments; in particular, there are sections on: · Transition path sampling and diffusive barrier crossing to simulaterare events · Dissipative particle dynamic as a course-grained simulation technique · Novel schemes to compute the long-ranged forces · Hamiltonian and non-Hamiltonian dynamics in the context constant-temperature and constant-pressure molecular dynamics simulations · Multiple-time step algorithms as an alternative for constraints · Defects in solids · The pruned-enriched Rosenbluth sampling, recoil-growth, and concerted rotations for complex molecules · Parallel tempering for glassy Hamiltonians Examples are included that highlight current applications and the codes of case studies are available on the World Wide Web. Several new examples have been added since the first edition to illustrate recent applications. Questions are included in this new edition. No prior knowledge of computer simulation is assumed.


Molecular Dynamics Simulations in Statistical Physics: Theory and Applications

Molecular Dynamics Simulations in Statistical Physics: Theory and Applications
Author: Hiqmet Kamberaj
Publisher: Springer Nature
Total Pages: 463
Release: 2020-03-20
Genre: Science
ISBN: 3030357023

Download Molecular Dynamics Simulations in Statistical Physics: Theory and Applications Book in PDF, ePub and Kindle

This book presents computer simulations using molecular dynamics techniques in statistical physics, with a focus on macromolecular systems. The numerical methods are introduced in the form of computer algorithms and can be implemented in computers using any desired computer programming language, such as Fortran 90, C/C++, and others. The book also explains how some of these numerical methods and their algorithms can be implemented in the existing computer programming software of macromolecular systems, such as the CHARMM program. In addition, it examines a number of advanced concepts of computer simulation techniques used in statistical physics as well as biological and physical systems. Discussing the molecular dynamics approach in detail to enhance readers understanding of the use of this method in statistical physics problems, it also describes the equations of motion in various statistical ensembles to mimic real-world experimental conditions. Intended for graduate students and research scientists working in the field of theoretical and computational biophysics, physics and chemistry, the book can also be used by postgraduate students of other disciplines, such as applied mathematics, computer sciences, and bioinformatics. Further, offering insights into fundamental theory, it as a valuable resource for expert practitioners and programmers and those new to the field.


Statistical Mechanics

Statistical Mechanics
Author: B. Widom
Publisher: Cambridge University Press
Total Pages: 182
Release: 2002-04-18
Genre: Science
ISBN: 9780521009669

Download Statistical Mechanics Book in PDF, ePub and Kindle

This book is an introduction to statistical mechanics, intended for advanced undergraduate or beginning graduate students.


Statistical Mechanics: Algorithms and Computations

Statistical Mechanics: Algorithms and Computations
Author: Werner Krauth
Publisher: Oxford University Press
Total Pages: 355
Release: 2006-09-14
Genre: Computers
ISBN: 0198515367

Download Statistical Mechanics: Algorithms and Computations Book in PDF, ePub and Kindle

CD-ROM contains more than one hundred pseudocode programs and close to 300 figures, line drawings, and tables contained in the book.


Nonequilibrium Gas Dynamics and Molecular Simulation

Nonequilibrium Gas Dynamics and Molecular Simulation
Author: Iain D. Boyd
Publisher: Cambridge University Press
Total Pages: 383
Release: 2017-03-23
Genre: Technology & Engineering
ISBN: 1107073448

Download Nonequilibrium Gas Dynamics and Molecular Simulation Book in PDF, ePub and Kindle

7.1 Introduction -- 7.2 Rotational Energy Exchange Models -- 7.2.1 Constant Collision Number -- 7.2.2 The Parker Model -- 7.2.3 Variable Probability Exchange Model of Boyd -- 7.2.4 Nonequilibrium Direction Dependent Model -- 7.2.5 Model Results -- 7.3 Vibrational Energy Exchange Models -- 7.3.1 Constant Collision Number -- 7.3.2 The Millikan-White Model -- 7.3.3 Quantized Treatment for Vibration -- 7.3.4 Model Results -- 7.4 Dissociation Chemical Reactions -- 7.4.1 Total Collision Energy Model -- 7.4.2 Redistribution of Energy Following a Dissociation Reaction -- 7.4.3 Vibrationally Favored Dissociation Model -- 7.5 General Chemical Reactions -- 7.5.1 Reaction Rates and Equilibrium Constant -- 7.5.2 Backward Reaction Rates in DSMC -- 7.5.3 Three-Body Recombination Reactions -- 7.5.4 Post-Reaction Energy Redistribution and General Implementation -- 7.5.5 DSMC Solutions for Reacting Flows -- 7.6 Summary -- Appendix A: Generating Particle Properties -- Appendix B: Collisional Quantities -- Appendix C: Determining Post-Collision Velocities -- Appendix D: Macroscopic Properties -- Appendix E: Common Integrals -- References -- Index


Theories of Molecular Reaction Dynamics

Theories of Molecular Reaction Dynamics
Author: Niels E. Henriksen
Publisher: Oxford University Press on Demand
Total Pages: 391
Release: 2008
Genre: Science
ISBN: 0199203865

Download Theories of Molecular Reaction Dynamics Book in PDF, ePub and Kindle

This book deals with a central topic at the interface of chemistry and physics - the understanding of how the transformation of matter takes place at the atomic level. Building on the laws of physics, the book focuses on the theoretical framework for predicting the outcome of chemical reactions. The style is highly systematic with attention to basic concepts and clarity of presentation. Molecular reaction dynamics is about the detailed atomic-level description of chemical reactions. Based on quantum mechanics and statistical mechanics or, as an approximation, classical mechanics, the dynamics of uni- and bi-molecular elementary reactions are described. The book features a detailed presentation of transition-state theory which plays an important role in practice, and a comprehensive discussion of basic theories of reaction dynamics in condensed phases. Examples and end-of-chapter problems are included in order to illustrate the theory and its connection to chemical problems.


Statistical Mechanics: Theory and Molecular Simulation

Statistical Mechanics: Theory and Molecular Simulation
Author: Mark E. Tuckerman
Publisher: Oxford University Press
Total Pages: 881
Release: 2023-08-02
Genre: Science
ISBN: 0192559613

Download Statistical Mechanics: Theory and Molecular Simulation Book in PDF, ePub and Kindle

Scientists are increasingly finding themselves engaged in research problems that cross the traditional disciplinary lines of physics, chemistry, biology, materials science, and engineering. Because of its broad scope, statistical mechanics is an essential tool for students and more experienced researchers planning to become active in such an interdisciplinary research environment. Powerful computational methods that are based in statistical mechanics allow complex systems to be studied at an unprecedented level of detail. This book synthesizes the underlying theory of statistical mechanics with the computational techniques and algorithms used to solve real-world problems and provides readers with a solid foundation in topics that reflect the modern landscape of statistical mechanics. Topics covered include detailed reviews of classical and quantum mechanics, in-depth discussions of the equilibrium ensembles and the use of molecular dynamics and Monte Carlo to sample classical and quantum ensemble distributions, Feynman path integrals, classical and quantum linear-response theory, nonequilibrium molecular dynamics, the Langevin and generalized Langevin equations, critical phenomena, techniques for free energy calculations, machine learning models, and the use of these models in statistical mechanics applications. The book is structured such that the theoretical underpinnings of each topic are covered side by side with computational methods used for practical implementation of the theoretical concepts.