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Molecular Biology of The Cell

Molecular Biology of The Cell
Author: Bruce Alberts
Publisher:
Total Pages: 0
Release: 2002
Genre: Cytology
ISBN: 9780815332183

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Microtubule-based Regulation of Vesicular Transport

Microtubule-based Regulation of Vesicular Transport
Author: Linda Balabanian
Publisher:
Total Pages:
Release: 2021
Genre:
ISBN:

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"Motor proteins kinesins and dynein are mechanoenzymes that catalyze ATP hydrolysis to take successive steps on microtubule filaments, while transporting organelles to their destinations. How do motor proteins efficiently navigate specific microtubule tracks to sort cargoes? The microtubule cytoskeleton regulates the trafficking and sorting of vesicles through interactions with microtubule-associated proteins, tubulin post-translational modifications and network organization. The impairment of transport causes neurodegenerative disease. The interplay of the microtubule-based regulatory factors poses challenges in understanding the regulation of intracellular transport and contributes to apparent discrepancies between studies in live cells and reconstituted in vitro systems. In my thesis, we address such regulatory mechanisms that modulate the efficient transport of cargoes on the microtubule network. Acetylated microtubules, abundant in neuronal axons and central regions of fibroblasts, constitute the preferred tracks for kinesin-1 motors. However, microtubule acetylation does not influence kinesin-1 motility in purified systems, suggesting that regulatory factors other than this post-translational modification contribute to the motor's track selection. We isolated intact microtubule networks from fibroblasts to conduct motility assays of purified kinesin-1. With this approach bridging live cell studies and reconstituted systems, we demonstrate that although tubulin acetylation does not directly impact kinesin-1 binding or motility, it is highly correlated with microtubule bundling, which leads to longer kinesin-1 run lengths. We expect that the higher local density of microtubules within bundles allows for rapid kinesin-1 re-attachment upon unbinding, extending the total displacement. We also investigated the role of neuronal microtubule-associated protein tau, which normally bundles acetylated axonal microtubules. Several studies show that tau strongly inhibits kinesin-1 in vitro, although paradoxically kinesin-1 driven transport is highly efficient on tau-decorated microtubules in neurons. We found that inhibition of kinesin-1 by tau is not affected by either microtubule acetylation or bundling on the isolated microtubule networks. This led us to further investigate how motor proteins can navigate tau-associated microtubules in fibroblasts, which do not endogenously express tau. As tau phosphorylation modulates tau's diffusivity on microtubules, we investigated the effects of wild-type (WT) tau (non-phosphorylated) and phosphomimetic tau (at Y18) on the motility of different organelles. We found that phosphomimetic tau does not inhibit the motility of centrally positioned lysosomes, whereas WT tau reduces the processivity of peripheral and central lysosomes similarly, as shown by mean squared displacement and radius of gyration measurements of their trajectories. Early endosomes are more sensitive to inhibition by both WT and phosphomimetic tau. Our model suggests that tau phosphorylation does not inhibit lysosomes that are driven by kinesin-1 on acetylated microtubule bundles, in contrast to the inhibition of kinesin-3 mediated transport in the periphery"--


The Role of the Microtubule Cytoskeleton in Regulating Intracellular Transport

The Role of the Microtubule Cytoskeleton in Regulating Intracellular Transport
Author: Linda Balabanian
Publisher:
Total Pages:
Release: 2017
Genre:
ISBN:

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"The motor proteins kinesin and dynein transport organelles, mRNA, proteins, and signaling molecules along the microtubule cytoskeleton. In addition to serving as tracks for transport, the microtubule cytoskeleton directs intracellular trafficking by regulating the activity of motor proteins through the organization of the filament network, microtubule-associated proteins (MAPs), and tubulin post-translational modifications (PTMs). However, it is not well understood how these factors influence motor motility, as in vitro assays and live cell observations often produce disparate results, likely due in part to the interdependencies between MAPs, PTMs, and cytoskeletal organization. For example, the MAP tau strongly inhibits kinesin-1 motility in purified systems, yet kinesin-1 drives long-range transport in neuronal axons where microtubules are heavily decorated with tau in vivo. While tau directly affects motility by acting as an obstacle to transport, tau also influences motor activity by promoting tubulin acetylation and acting to stabilize and bundle microtubules. To systematically examine the factors that contribute to cytoskeleton-based regulation of motor protein motility in a simple in vitro system, we extracted intact, native microtubule networks from cells and tracked the motility of single fluorescently-labeled motor proteins on these cytoskeletons using Total Internal Reflection Fluorescence (TIRF) microscopy. Using this system, we show that tubulin acetylation alone does not confer track selectivity to kinesin-1 or change its behaviour. Rather, microtubule bundling, closely associated with this PTM, enhances motor motility. We examined the binding of the MAP tau on extracted microtubule networks and its influence on motor behavior. Tau induces kinesin-1 to pause more often and reduces its run length. Tau diffuses on microtubule filaments and binds prefentially on the highly curved regions of the lattice. This work is supported by NSERC." --


The Cytoskeleton

The Cytoskeleton
Author: James Spudich
Publisher:
Total Pages: 0
Release: 1996
Genre: Actin
ISBN: 9780824331733

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Cell Biology by the Numbers

Cell Biology by the Numbers
Author: Ron Milo
Publisher: Garland Science
Total Pages: 400
Release: 2015-12-07
Genre: Science
ISBN: 1317230698

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A Top 25 CHOICE 2016 Title, and recipient of the CHOICE Outstanding Academic Title (OAT) Award. How much energy is released in ATP hydrolysis? How many mRNAs are in a cell? How genetically similar are two random people? What is faster, transcription or translation?Cell Biology by the Numbers explores these questions and dozens of others provid


Cytoskeleton and Human Disease

Cytoskeleton and Human Disease
Author: Maria Kavallaris
Publisher: Springer Science & Business Media
Total Pages: 463
Release: 2012-04-23
Genre: Science
ISBN: 161779788X

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The cytoskeleton is comprised of a variety of specialized proteins, and is a dynamic structure that is involved in the majority of key cellular events. There is increasing interest in the role of the cytoskeleton in human disease. This volume brings together human disease states where cytoskeletal disruptions are driving disease. Our emerging understanding of the molecular and cellular events that drive cytoskeletal mediated diseases including cancer, heart disease, myopathies and skin disorders, are also helping shape targeted therapeutic approaches to treating these diseases.


Actin-based Motility

Actin-based Motility
Author: Marie-France Carlier
Publisher: Springer Science & Business Media
Total Pages: 434
Release: 2010-09-23
Genre: Medical
ISBN: 904819301X

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Since the discovery of actin by Straub in the 1950’s and the pioneering work of Oosawa on actin self-assembly in helical laments in the 1960’s, many books and conference proceedings have been published. As one of the most essential p- teins in life, essential for movement in organisms rangingfrom bacteria to higher eukaryotes, it is no surprise that actin has fascinated generations of scientists from many different elds. Actin can be considered as a “living treasure” of biology; the kinetics and thermodynamics of self-assembly, the dissipative nature of actin po- merization, the molecular interactions of monomeric and polymerized actin with regulators, the mechanical properties of actin gels, and more recently the force p- ducing motile and morphogenetic processes organized by the actin nanomachine in response to signaling, are all milestones in actin research. Discoveries that directly derive from and provide deeper insight into the fundamental properties of actin are constantly being made, making actin an ever appealing research molecule. At the same time, the explosion in new technologies and techniques in biological sciences has served to attract researchers from an expanding number of disciplines, to study actin. This book presents the latest developments of these new multiscale approaches of force and movement powered by self-assembly processes, with the hope to opening our perspectives on the many areas of actin-based motility research.


Dissecting the Coordinated Transport of Molecular Motors a Single Molecule Approach Towards Studying Bidirectional Motion

Dissecting the Coordinated Transport of Molecular Motors a Single Molecule Approach Towards Studying Bidirectional Motion
Author: Abdullah Chaudhary
Publisher:
Total Pages:
Release: 2020
Genre:
ISBN:

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"Many cellular processes are driven by the collective action of motors working in teams. One such example of this type of phenomenon is intracellular transport -- the transport of cargoes carried out by teams of similar or opposite polarity motors (kinesin and dynein). In most cells, long-range transport occurs along microtubules that are oriented with their plus ends towards the cell periphery, and minus ends towards the cell body. Despite the presence of opposite polarity motors, the mechanism by which cargoes are directed to specific locations in the cell is not well understood. A set of microtubule-associated proteins (MAPs) and scaffolding molecules have been shown to have some effect on motility and cargo directionality, but the mechanism by which these molecules tune motor specific processivity is not well understood. Defects in intracellular trafficking can result in severe developmental and neurodegenerative diseases. One prominent example is Huntington’s disease (HD), which is an autosomal dominant neurodegenerative disorder caused by an extension of the CAG repeat region in the N-terminus of the huntingtin gene. Though it is clear that wild-type huntingtin plays a role in intracellular trafficking by interacting with motor and motor-associated proteins, it is unclear how post-translational modifications (PTMs) modulate the activity of motor proteins and the specific biophysical mechanism behind this activity. In HD, mutated huntingtin aggregates in neurons, disrupting cargo transport. Disruption in vesicle transport results in abnormal cell signaling and impaired clearance of damaged proteins and organelles. This suggests a mechanism where defects in transport are due to misregulation of motor protein activity by vesicle-bound huntingtin.In addition to scaffolding molecules like huntingtin, transport is also regulated by microtubule-associated proteins (MAPs) that bind along the microtubule surface. Tau is a neuronal MAP that stabilizes axonal microtubules by crosslinking them into bundles. It also indirectly modulates cargo motility by serving as a roadblock to motors. Misregulation of tau leads to a range of neurodegenerative diseases known as tauopathies, including Alzheimer’s disease (AD). In AD, tau hyperphosphorylation leads to the development of fibrillary bodies that aggregate to form neurofibrillary tangles (NFTs). Varying concentration of tau inhibits single motor and multiple motor activity. Yet, despite the presence of tau in healthy neurons, teams of motors are still able to navigate efficiently over long distances in the axon without being inhibited. Similar to tau, MAP7 (ensconsin) also binds along microtubules and stabilizes them. It organizes the microtubule cytoskeleton in mitosis and neuronal branching. MAP7 not only promotes the interaction of kinesin-1 to microtubules but also competes with tau for binding along microtubules to regulate kinesin transport. Since bidirectional motility is a hallmark of intracellular transport, understanding how MAPs regulate teams of kinesin and dynein motors will provide insight into how transport is regulated"--