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Plant Genomic and Cytogenetic Databases

Plant Genomic and Cytogenetic Databases
Author: Sònia Garcia
Publisher: Springer Nature
Total Pages: 252
Release: 2023-10-01
Genre: Science
ISBN: 1071633899

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This volume discusses the latest online plant genomics and cytogenetic resources used by plant evolutionary biologists and plant breeders. The chapters in this book are organized into two parts. Part One looks at plant genomic databases, and covers topics such as plant phenomics and genomics research data repositories, InpactorDB, PlanTEenrichment, and PEATmoss, among others. Part Two looks at cytogenetics and chromosome-related databases, and covers resources such as the Plant DNA C-values database, the Delphineae Chromosome Database (DCDB), B-chrom, a Database on B-chromosomes, and the Plant Ribosomal DNA Database. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective databases and offers explicit directions on how to access and get the most of these resources. Cutting-edge and comprehensive, Plant Genomic and Cytogenetic Databases is a valuable instrument for any plant science researcher who is interested in learning more about the wealth of information that is available through the use of these databases.


Plant Genomics and Proteomics

Plant Genomics and Proteomics
Author: Christopher A. Cullis
Publisher: John Wiley & Sons
Total Pages: 230
Release: 2004-01-20
Genre: Science
ISBN: 0471488585

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Plant research has stood at the forefront of the genomics revolution. One of the first genome projects, the sequencing of the commonly used model organism Arabidopsis, has already yielded important results for the study of a broad array of crops such as corn and soybeans. With crop and food bioengineering only in its infancy, the need to understand the fundamental genetic mechanisms of plants will only become more pressing. A comprehensive guide to this fascinating area of genomics, Plant Genomics and Proteomics presents an integrated, broadly accessible treatment of the complex relationship between the genome, transcriptome, and proteome of plants. This clearly written text introduces the reader to the range of molecular techniques applicable to investigating the unique facets of plant growth, development, and response to the environment. Coverage includes: Functional and structural genomics addressed within the context of current techniques and challenges to come How to utilize DNA and protein sequence data Practical considerations for choosing and employing the most commonly available computer applications A review of applications for biotechnology, including genetic modification and defense against pathogens Bioinformatics tools and Web resources Numerous examples from the latest research throughout Assuming no specialized knowledge of plant biology on the part of its reader, Plant Genomics and Proteomics provides an invaluable resource for students and researchers in biotechnology, plant biology, genomics, and bioinformatics.


Plant Genomics

Plant Genomics
Author: Ibrokhim Y. Abdurakhmonov
Publisher: BoD – Books on Demand
Total Pages: 312
Release: 2016-07-14
Genre: Science
ISBN: 9535124552

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Plant genomics aims to sequence, characterize, and study the genetic compositions, structures, organizations, functions, and interactions/networks of an entire plant genome. Its development and advances are tightly interconnected with proteomics, metabolomics, metagenomics, transgenomics, genomic selection, bioinformatics, epigenomics, phenomics, system biology, modern instrumentation, and robotics sciences. Plant genomics has significantly advanced over the past three decades in the land of inexpensive, high-throughput sequencing technologies and fully sequenced over 100 plant genomes. These advances have broad implications in every aspect of plant biology and breeding, powered with novel genomic selection and manipulation tools while generating many grand challenges and tasks ahead. This Plant genomics provides some updated discussions on current advances, challenges, and future perspectives of plant genome studies and applications.


Plant Genomics Databases: Methods and Protocols

Plant Genomics Databases: Methods and Protocols
Author: Aalt D. J. van Dijk
Publisher: Methods in Molecular Biology
Total Pages: 350
Release: 2018-12-31
Genre: Science
ISBN: 9781493982639

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Plant Cytogenetics

Plant Cytogenetics
Author: Hank Bass
Publisher: Springer Science & Business Media
Total Pages: 346
Release: 2011-12-02
Genre: Science
ISBN: 0387708693

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This reference book provides information on plant cytogenetics for students, instructors, and researchers. Topics covered by international experts include classical cytogenetics of plant genomes; plant chromosome structure; functional, molecular cytology; and genome dynamics. In addition, chapters are included on several methods in plant cytogenetics, informatics, and even laboratory exercises for aspiring or practiced instructors. The book provides a unique combination of historical and modern subject matter, revealing the central role of plant cytogenetics in plant genetics and genomics as currently practiced. This breadth of coverage, together with the inclusion of methods and instruction, is intended to convey a deep and useful appreciation for plant cytogenetics. We hope it will inform and inspire students, researchers, and teachers to continue to employ plant cytogenetics to address fundamental questions about the cytology of plant chromosomes and genomes for years to come. Hank W. Bass is a Professor in the Department of Biological Science at Florida State University. James A. Birchler is a Professor in the Division of Biological Sciences at the University of Missouri.


Plant Cytogenetics, Breeding and Evolution

Plant Cytogenetics, Breeding and Evolution
Author: Bentlee Salinas
Publisher: Scientific e-Resources
Total Pages: 404
Release: 2018-12-21
Genre:
ISBN: 183947274X

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There are about 300-315 thousand species of plants, of which the great majority, some 260-290 thousand, are seed plants. Green plants provide a substantial proportion of the world's molecular oxygen and are the basis of most of Earth's Ecologies, especially on land. Plants that produce grains, fruits and vegetables form humankind's basic foodstuffs, and have been domesticated for millennia. Plants play many roles in culture. They are used as ornaments and, until recently and in great variety, they have served as the source of most medicines and drugs. The scientific study of plants is known as botany, a branch of biology. Plant Cytogenetics, Breeding and Evolution Plant Cytogenetics comprises a topic of broad interest and increasing importance in plant science. In keeping with the exciting advances in plant genetics and genomics, we believe that a comprehensive and up-to-date reference on Plant Cytogenetics would be of great interest and value for researchers, instructors, and students with interests in genetics, plant biology, and plant genomics.


Plant Genes, Genomes and Genetics

Plant Genes, Genomes and Genetics
Author: Erich Grotewold
Publisher: John Wiley & Sons
Total Pages: 261
Release: 2015-06-02
Genre: Science
ISBN: 1119998883

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Plant Genes, Genomes and Genetics provides a comprehensive treatment of all aspects of plant gene expression. Unique in explaining the subject from a plant perspective, it highlights the importance of key processes, many first discovered in plants, that impact how plants develop and interact with the environment. This text covers topics ranging from plant genome structure and the key control points in how genes are expressed, to the mechanisms by which proteins are generated and how their activities are controlled and altered by posttranslational modifications. Written by a highly respected team of specialists in plant biology with extensive experience in teaching at undergraduate and graduate level, this textbook will be invaluable for students and instructors alike. Plant Genes, Genomes and Genetics also includes: specific examples that highlight when and how plants operate differently from other organisms special sections that provide in-depth discussions of particular issues end-of-chapter problems to help students recapitulate the main concepts rich, full-colour illustrations and diagrams clearly showing important processes in plant gene expression a companion website with PowerPoint slides, downloadable figures, and answers to the questions posed in the book Aimed at upper level undergraduates and graduate students in plant biology, this text is equally suited for advanced agronomy and crop science students inclined to understand molecular aspects of organismal phenomena. It is also an invaluable starting point for professionals entering the field of plant biology.


Plant Cytogenetics and Cytogenomics

Plant Cytogenetics and Cytogenomics
Author: Tony Heitkam
Publisher: Springer Nature
Total Pages: 563
Release: 2023-07-21
Genre: Science
ISBN: 1071632264

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This book provides an up-to-date account of the most widespread methods used by specialists in the field of plant cytogenetics and the emerging field of cytogenomics that will likely soon be adapted by more labs. From the classical basic karyological approaches to the most recent genomics-informed and computational methods, the volume explores genome size and ploidy level estimation, chromosome fixation, preparation, and manipulation, banding and staining techniques, in situ hybridization, as well as numerous methods that integrate cytogenetics with bioinformatics and computational genomics. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible laboratory protocols, as well as tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Plant Cytogenetics and Cytogenomics: Methods and Protocols serves as an ideal resource for plant scientists interested in molecular and evolutionary biology, breeding, systematics, and plant -omics in general.


Plant Cytogenetics

Plant Cytogenetics
Author: Maria J. Puertas
Publisher: S. Karger AG (Switzerland)
Total Pages: 0
Release: 2005
Genre: Cytogenetics
ISBN: 9783805578998

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Plants have played a significant role in the discovery of inheritance principles and many biological phenomena, such as the chromosomal basis of inheritance, the genome dynamics conferred by transposable elements, or the evolutionary implications of chromosomal mutations. While the molecular basis of gene structure and function has been widely studied, many aspects of chromosome structure, its functional significance and evolutionary implications remain to be established. This special issue of Cytogenetic and Genome Research presents an excellent compilation of current research in a wide range of cultivated and wild plant species. The contributions, reviews as well as original articles by experts in the field, reflect representative aspects of nuclear and chromosome organization, behavior in somatic and germ cells, evolution, and manipulation in breeding programs. It is an excellent source of information for investigators and students in plant genetics, plant biology and agronomy.


Plant Genome Diversity Volume 1

Plant Genome Diversity Volume 1
Author: Jonathan Wendel
Publisher: Springer Science & Business Media
Total Pages: 282
Release: 2012-03-23
Genre: Science
ISBN: 3709111307

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In this timely new 2-volume treatise, experts from around the world have banded together to produce a first-of-its-kind synopsis of the exciting and fast moving field of plant evolutionary genomics. In Volume I of Plant Genome Diversity, an update is provided on what we have learned from plant genome sequencing projects. This is followed by more focused chapters on the various genomic “residents” of plant genomes, including transposable elements, centromeres, small RNAs, and the evolutionary dynamics of genes and non-coding sequences. Attention is drawn to advances in our understanding of plant mitochondrial and plastid genomes, as well as the significance of duplication in genic evolution and the non-independent evolution among sequences in plant genomes. Finally, Volume I provides an introduction to the vibrant new frontier of plant epigenomics, describing the current state of our knowledge and the evolutionary implications of the epigenomic landscape.