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Normal Mode Analysis

Normal Mode Analysis
Author: Qiang Cui
Publisher: CRC Press
Total Pages: 448
Release: 2005-12-12
Genre: Mathematics
ISBN: 142003507X

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Rapid developments in experimental techniques continue to push back the limits in the resolution, size, and complexity of the chemical and biological systems that can be investigated. This challenges the theoretical community to develop innovative methods for better interpreting experimental results. Normal Mode Analysis (NMA) is one such technique


Normal Modes and Localization in Nonlinear Systems

Normal Modes and Localization in Nonlinear Systems
Author: Alexander F. Vakakis
Publisher: Springer Science & Business Media
Total Pages: 290
Release: 2013-06-29
Genre: Science
ISBN: 9401724520

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The nonlinear normal modes of a parametrically excited cantilever beam are constructed by directly applying the method of multiple scales to the governing integral-partial differential equation and associated boundary conditions. The effect of the inertia and curvature nonlin earities and the parametric excitation on the spatial distribution of the deflection is examined. The results are compared with those obtained by using a single-mode discretization. In the absence of linear viscous and quadratic damping, it is shown that there are nonlinear normal modes, as defined by Rosenberg, even in the presence of a principal parametric excitation. Furthermore, the nonlinear mode shape obtained with the direct approach is compared with that obtained with the discretization approach for some values of the excitation frequency. In the single-mode discretization, the spatial distribution of the deflection is assumed a priori to be given by the linear mode shape ¢n, which is parametrically excited, as Equation (41). Thus, the mode shape is not influenced by the nonlinear curvature and nonlinear damping. On the other hand, in the direct approach, the mode shape is not assumed a priori; the nonlinear effects modify the linear mode shape ¢n. Therefore, in the case of large-amplitude oscillations, the single-mode discretization may yield inaccurate mode shapes. References 1. Vakakis, A. F., Manevitch, L. I., Mikhlin, Y. v., Pilipchuk, V. N., and Zevin A. A., Nonnal Modes and Localization in Nonlinear Systems, Wiley, New York, 1996.


Molecular Modeling of Proteins

Molecular Modeling of Proteins
Author: Andreas Kukol
Publisher: Humana Press
Total Pages: 474
Release: 2017-04-30
Genre: Science
ISBN: 9781493954919

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Molecular Modeling of Proteins, Second Edition provides a theoretical background of various methods available and enables non-specialists to apply methods to their problems by including updated chapters and new material not covered in the first edition. This detailed volume opens by featuring classical and advanced simulation methods as well as methods to set-up complex systems such as lipid membranes and membrane proteins and continues with chapters devoted to the simulation and analysis of conformational changes of proteins, computational methods for protein structure prediction, usage of experimental data in combination with computational techniques, as well as protein-ligand interactions, which are relevant in the drug design process. Written for the highly successful Methods in Molecular Biology series, chapters include thorough introductions, step-by-step instructions and notes on troubleshooting and avoiding common pitfalls. Update-to-date and authoritative, Molecular Modeling of Proteins, Second Edition aims to aid researchers in the physical, chemical and biosciences interested in utilizing this powerful technology.


The Physics of Waves

The Physics of Waves
Author: Howard Georgi
Publisher: Addison Wesley Publishing Company
Total Pages: 442
Release: 1993
Genre: Science
ISBN:

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The first complete introduction to waves and wave phenomena by a renowned theorist. Covers damping, forced oscillations and resonance; normal modes; symmetries; traveling waves; signals and Fourier analysis; polarization; diffraction.


Protein Simulations

Protein Simulations
Author: Valerie Daggett
Publisher: Elsevier
Total Pages: 477
Release: 2003-11-26
Genre: Medical
ISBN: 0080493785

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Protein Simulation focuses on predicting how protein will act in vivo. These studies use computer analysis, computer modeling, and statistical probability to predict protein function. * Force Fields* Ligand Binding* Protein Membrane Simulation* Enzyme Dynamics* Protein Folding and unfolding simulations


Atomistic Approaches in Modern Biology

Atomistic Approaches in Modern Biology
Author: Markus Reiher
Publisher: Springer Science & Business Media
Total Pages: 368
Release: 2007-01-08
Genre: Science
ISBN: 3540380825

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With contributions by numerous experts


Introduction to Structural Dynamics and Aeroelasticity

Introduction to Structural Dynamics and Aeroelasticity
Author: Dewey H. Hodges
Publisher: Cambridge University Press
Total Pages: 0
Release: 2014-01-02
Genre: Technology & Engineering
ISBN: 9781107617094

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This text provides an introduction to structural dynamics and aeroelasticity, with an emphasis on conventional aircraft. The primary areas considered are structural dynamics, static aeroelasticity, and dynamic aeroelasticity. The structural dynamics material emphasizes vibration, the modal representation, and dynamic response. Aeroelastic phenomena discussed include divergence, aileron reversal, airload redistribution, unsteady aerodynamics, flutter, and elastic tailoring. More than one hundred illustrations and tables help clarify the text, and more than fifty problems enhance student learning. This text meets the need for an up-to-date treatment of structural dynamics and aeroelasticity for advanced undergraduate or beginning graduate aerospace engineering students. Praise from the First Edition "Wonderfully written and full of vital information by two unequalled experts on the subject, this text meets the need for an up-to-date treatment of structural dynamics and aeroelasticity for advanced undergraduate or beginning graduate aerospace engineering students." - Current Engineering Practice "Hodges and Pierce have written this significant publication to fill an important gap in aeronautical engineering education. Highly recommended." - Choice ". . . a welcome addition to the textbooks available to those with interest in aeroelasticity. . . . As a textbook, it serves as an excellent resource for advanced undergraduate and entry-level graduate courses in aeroelasticity. . . . Furthermore, practicing engineers interested in a background in aeroelasticity will find the text to be a friendly primer." - AIAA Bulletin


Infrared and Raman Spectroscopy

Infrared and Raman Spectroscopy
Author: Peter Larkin
Publisher: Elsevier
Total Pages: 288
Release: 2017-11-13
Genre: Science
ISBN: 0128042095

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Infrared and Raman Spectroscopy, Principles and Spectral Interpretation, Second Edition provides a solid introduction to vibrational spectroscopy with an emphasis on developing critical interpretation skills. This book fully integrates the use of both IR and Raman spectroscopy as spectral interpretation tools, enabling the user to utilize the strength of both techniques while also recognizing their weaknesses. This second edition more than doubles the amount of interpreted IR and Raman spectra standards and spectral unknowns. The chapter on characteristic group frequencies is expanded to include increased discussions of sulphur and phosphorus organics, aromatic and heteroaromatics as well as inorganic compounds. New topics include a discussion of crystal lattice vibrations (low frequency/THz), confocal Raman microscopy, spatial resolution in IR and Raman microscopy, as well as criteria for selecting Raman excitation wavelengths. These additions accommodate the growing use of vibrational spectroscopy for process analytical monitoring, nanomaterial investigations, and structural and identity determinations to an increasing user base in both industry and academia. Integrates discussion of IR and Raman spectra Pairs generalized IR and Raman spectra of functional groups with tables and text Includes over 150 fully interpreted, high quality IR and Raman reference spectra Contains fifty-four unknown IR and Raman spectra, with a corresponding answer key


Psychoanalysis for Normal People

Psychoanalysis for Normal People
Author: Geraldine Coster
Publisher: Read Books Ltd
Total Pages: 236
Release: 2013-04-26
Genre: Psychology
ISBN: 1473382459

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“Psychoanalysis for Normal People” is a vintage book on personal psychology and psychoanalysis by Geraldine Coster. Within it, Coster explains the basic principles of psychoanalysis and offers the reader simple instructions on how psychology and psychoanalysis can help in their day-to-day life, from the little things to the seemingly big and insurmountable. This fantastic volume will appeal to those with an interest in self improvement and psychology, and it is is not to be missed by collectors of vintage literature of this ilk. Many vintage books such as this are increasingly scarce and expensive. It is with this in mind that we are republishing this classic volume now in an affordable, modern, high-quality edition for the enjoyment of readers now and for years to come.


Ab Initio Molecular Dynamics

Ab Initio Molecular Dynamics
Author: Dominik Marx
Publisher: Cambridge University Press
Total Pages: 503
Release: 2009-04-30
Genre: Science
ISBN: 1139477196

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Ab initio molecular dynamics revolutionized the field of realistic computer simulation of complex molecular systems and processes, including chemical reactions, by unifying molecular dynamics and electronic structure theory. This book provides the first coherent presentation of this rapidly growing field, covering a vast range of methods and their applications, from basic theory to advanced methods. This fascinating text for graduate students and researchers contains systematic derivations of various ab initio molecular dynamics techniques to enable readers to understand and assess the merits and drawbacks of commonly used methods. It also discusses the special features of the widely used Car–Parrinello approach, correcting various misconceptions currently found in research literature. The book contains pseudo-code and program layout for typical plane wave electronic structure codes, allowing newcomers to the field to understand commonly used program packages and enabling developers to improve and add new features in their code.