New Methods For Studying Structure And Dynamics Of Rna PDF Download

Are you looking for read ebook online? Search for your book and save it on your Kindle device, PC, phones or tablets. Download New Methods For Studying Structure And Dynamics Of Rna PDF full book. Access full book title New Methods For Studying Structure And Dynamics Of Rna.

RNA Structure and Dynamics

RNA Structure and Dynamics
Author: Jienyu Ding
Publisher: Springer Nature
Total Pages: 256
Release: 2022-10-13
Genre: Science
ISBN: 1071626876

Download RNA Structure and Dynamics Book in PDF, ePub and Kindle

This volume provides a wide spectrum of multidisciplinary approaches for studying RNA structure and dynamics, including detailed accounts of experimental and computational procedures. Chapters guide readers through cryo-electron microscopy, crystallography, isothermal titration calorimetry, small angle X-ray scattering, single-molecule Förster Energy transfer, X-ray free electron laser, atomic force microscopy, computational simulation, and prediction. Written in the format of the highly successful Methods in Molecular Biology series, each chapter includes an introduction to the topic, lists necessary materials and reagents, includes tips on troubleshooting and known pitfalls, and step-by-step, readily reproducible protocols. Authoritative and cutting-edge, RNA Structure and Dynamics aims to be a foundation for future studies and to be a source of inspiration for new investigations in the field.


Structure and Dynamics of RNA

Structure and Dynamics of RNA
Author:
Publisher:
Total Pages: 352
Release: 1986-10-31
Genre:
ISBN: 9781468451740

Download Structure and Dynamics of RNA Book in PDF, ePub and Kindle


Structure and Dynamics of RNA

Structure and Dynamics of RNA
Author: P. H. van Knippenberg
Publisher: Springer Science & Business Media
Total Pages: 335
Release: 2013-03-08
Genre: Technology & Engineering
ISBN: 1468451731

Download Structure and Dynamics of RNA Book in PDF, ePub and Kindle

This volume contains contributions from the speakers at the NATO Advanced Research Workshop on "3D 5tructure and Dynamics of RNA", which was held in Renesse, The Netherlands, 21 - 24 August, 1985. Two major developments have determined the progress of nucleic acid research during the last decade. First, manipulation of genetic material by recombinant DNA methodology has enabled detailed studies of the function of nucleic acids in vivo. 5econd, the use of powerful physical methods, such as X-ray diffraction and nuclear magnetic resonance spectroscopy, in the study of biomacromolecules has provided information regarding the structure and the dynamics of nucleic acids. Both developments were enabled by the advance of synthetic methods that allow preparation of nucleic acid molecules of required sequence and length. The basic understanding of nucleic acid function will ultimately depend on a close collaboration between molecular biologists and biophy sicists. In the case of RNA, the ground rules for the formation of secondary structure have been derived from physical studies of oligoribonucleotides. Powerfull spectroscopic techniques have revealed more details of ~~A structure including novel conformations (e.g. left-handed Z-RNA). A wealth of information has been obtained by studying the relatively small transfer RNA molecules. A few of these RNAs have been crystallized, enabling determination of their three-dimensional structure. It has become apparent that "non-classical" basepairing between distal nucleotides gives rise to tertiary interactions, determining the overall shape of the molecule.


Structures of Large RNA Molecules and Their Complexes

Structures of Large RNA Molecules and Their Complexes
Author:
Publisher: Academic Press
Total Pages: 675
Release: 2015-06-06
Genre: Science
ISBN: 0128019360

Download Structures of Large RNA Molecules and Their Complexes Book in PDF, ePub and Kindle

This new volume of Methods in Enzymology continues the legacy of this premier serial with quality chapters authored by leaders in the field. This volume covers research methods in RNA folding and dynamics, RNA-protein interactions and large RNPs. Continues the legacy of this premier serial with quality chapters on structures of large RNA molecules and their complexes


Protein-Nucleic Acid Interactions

Protein-Nucleic Acid Interactions
Author: Phoebe A. Rice
Publisher: Royal Society of Chemistry
Total Pages: 417
Release: 2008-05-22
Genre: Science
ISBN: 0854042725

Download Protein-Nucleic Acid Interactions Book in PDF, ePub and Kindle

This book provides both in-depth background and up-to-date information in this area. The chapters are organized by general themes and principles, written by experts who illustrate topics with current findings. Topics covered include: - the role of ions and hydration in protein-nucleic acid interactions - transcription factors and combinatorial specificity - indirect readout of DNA sequence - single-stranded nucleic acid binding proteins - nucleic acid junctions and proteins, - RNA protein recognition - recognition of DNA damage. It will be a key reference for both advanced students and established scientists wishing to broaden their horizons.


Advances in Protein Molecular and Structural Biology Methods

Advances in Protein Molecular and Structural Biology Methods
Author: Timir Tripathi
Publisher: Academic Press
Total Pages: 716
Release: 2022-01-14
Genre: Science
ISBN: 0323902650

Download Advances in Protein Molecular and Structural Biology Methods Book in PDF, ePub and Kindle

Advances in Protein Molecular and Structural Biology Methods offers a complete overview of the latest tools and methods applicable to the study of proteins at the molecular and structural level. The book begins with sections exploring tools to optimize recombinant protein expression and biophysical techniques such as fluorescence spectroscopy, NMR, mass spectrometry, cryo-electron microscopy, and X-ray crystallography. It then moves towards computational approaches, considering structural bioinformatics, molecular dynamics simulations, and deep machine learning technologies. The book also covers methods applied to intrinsically disordered proteins (IDPs)followed by chapters on protein interaction networks, protein function, and protein design and engineering. It provides researchers with an extensive toolkit of methods and techniques to draw from when conducting their own experimental work, taking them from foundational concepts to practical application. Presents a thorough overview of the latest and emerging methods and technologies for protein study Explores biophysical techniques, including nuclear magnetic resonance, X-ray crystallography, and cryo-electron microscopy Includes computational and machine learning methods Features a section dedicated to tools and techniques specific to studying intrinsically disordered proteins


Computational studies of RNA and DNA

Computational studies of RNA and DNA
Author: Jirí Šponer
Publisher: Springer Science & Business Media
Total Pages: 638
Release: 2006-10-05
Genre: Science
ISBN: 1402048513

Download Computational studies of RNA and DNA Book in PDF, ePub and Kindle

This book integrates modern computational studies of nucleic acids, ranging from advanced electronic structure quantum chemical calculations through explicit solvent molecular dynamics (MD) simulations up to mesoscopic modelling, with the main focus given to the MD field. It gives an equal emphasis to the leading methods and applications while successes as well as pitfalls of the computational techniques are discussed.


RNA Worlds: New Tools for Deep Exploration

RNA Worlds: New Tools for Deep Exploration
Author: Thomas R. Cech
Publisher:
Total Pages: 580
Release: 2018-12-31
Genre: Science
ISBN: 9781621822240

Download RNA Worlds: New Tools for Deep Exploration Book in PDF, ePub and Kindle

"A Subject Collection from Cold Spring Harbor Perspectives in Biology."


Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes

Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes
Author: Adam Liwo
Publisher: Springer
Total Pages: 851
Release: 2018-12-19
Genre: Technology & Engineering
ISBN: 3319958437

Download Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes Book in PDF, ePub and Kindle

This book provides a comprehensive overview of modern computer-based techniques for analyzing the structure, properties and dynamics of biomolecules and biomolecular processes. It is organized in four main parts; the first one deals with methodology of molecular simulations; the second one with applications of molecular simulations; the third one introduces bioinformatics methods and the use of experimental information in molecular simulations; the last part reports on selected applications of molecular quantum mechanics. This second edition has been thoroughly revised and updated to include the latest progresses made in the respective field of research.