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Evolutionary Genomics

Evolutionary Genomics
Author: Maria Anisimova
Publisher: Humana Press
Total Pages: 556
Release: 2012-03-08
Genre: Medical
ISBN: 9781617795848

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Together with early theoretical work in population genetics, the debate on sources of genetic makeup initiated by proponents of the neutral theory made a solid contribution to the spectacular growth in statistical methodologies for molecular evolution. Evolutionary Genomics: Statistical and Computational Methods is intended to bring together the more recent developments in the statistical methodology and the challenges that followed as a result of rapidly improving sequencing technologies. Presented by top scientists from a variety of disciplines, the collection includes a wide spectrum of articles encompassing theoretical works and hands-on tutorials, as well as many reviews with key biological insight. Volume 2 begins with phylogenomics and continues with in-depth coverage of natural selection, recombination, and genomic innovation. The remaining chapters treat topics of more recent interest, including population genomics, -omics studies, and computational issues related to the handling of large-scale genomic data. Written in the highly successful Methods in Molecular BiologyTM series format, this work provides the kind of advice on methodology and implementation that is crucial for getting ahead in genomic data analyses. Comprehensive and cutting-edge, Evolutionary Genomics: Statistical and Computational Methods is a treasure chest of state-of the-art methods to study genomic and omics data, certain to inspire both young and experienced readers to join the interdisciplinary field of evolutionary genomics.


Molecular Research in Rice

Molecular Research in Rice
Author: Kiyosumi Hori
Publisher: Mdpi AG
Total Pages: 378
Release: 2020-10-06
Genre: Science
ISBN: 9783039432387

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This volume presents recent research achievements concerning the molecular genetic basis of agronomic traits in rice. Rice (Oryza sativa L.) is the most important food crop in the world, being a staple food for more than half of the world's population. Recent improvements in living standards have increased the worldwide demand for high-yielding and high-quality rice cultivars. To achieve improved agricultural performance in rice, while overcoming the challenges presented by climate change, it is essential to understand the molecular basis of agronomically important traits. Recently developed techniques in molecular biology, especially in genomics and other related omics fields, can reveal the complex molecular mechanisms involved in the control of agronomic traits. As rice was the first crop genome to be sequenced, in 2004, molecular research tools for rice are well-established, and further molecular studies will enable the development of novel rice cultivars with superior agronomic performance.


Molecular Research in Rice

Molecular Research in Rice
Author: Kiyosumi Hori
Publisher: Mdpi AG
Total Pages: 0
Release: 2022-12-13
Genre:
ISBN: 9783036549439

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This volume presents recent research achievements concerning the molecular genetic basis of agronomic traits in rice. Rice (Oryza sativa L.) is the most important food crop in the world, being a staple food for more than half of the world's population. Recent improvements in living standards have increased the worldwide demand for high-yielding and high-quality rice cultivars. To develop novel cultivars with superior agronomic performance, we need to understand the molecular basis of agronomically important traits related to grain yield, grain quality, disease resistance, and abiotic stress tolerance. Decoding the whole rice genome sequence revealed that, while there are more than 37,000 genes in the 400 Mbp rice genome, there are only about 3000 genes whose molecular functions are characterized in detail. We collected in this volume the continued research efforts of scholars that elucidate genetic networks and the molecular mechanisms controlling agronomically important traits in rice.


Rice Improvement

Rice Improvement
Author: Jauhar Ali
Publisher: Springer Nature
Total Pages: 507
Release: 2021-05-05
Genre: Technology & Engineering
ISBN: 3030665305

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This book is open access under a CC BY 4.0 license. By 2050, human population is expected to reach 9.7 billion. The demand for increased food production needs to be met from ever reducing resources of land, water and other environmental constraints. Rice remains the staple food source for a majority of the global populations, but especially in Asia where ninety percent of rice is grown and consumed. Climate change continues to impose abiotic and biotic stresses that curtail rice quality and yields. Researchers have been challenged to provide innovative solutions to maintain, or even increase, rice production. Amongst them, the ‘green super rice’ breeding strategy has been successful for leading the development and release of multiple abiotic and biotic stress tolerant rice varieties. Recent advances in plant molecular biology and biotechnologies have led to the identification of stress responsive genes and signaling pathways, which open up new paradigms to augment rice productivity. Accordingly, transcription factors, protein kinases and enzymes for generating protective metabolites and proteins all contribute to an intricate network of events that guard and maintain cellular integrity. In addition, various quantitative trait loci associated with elevated stress tolerance have been cloned, resulting in the detection of novel genes for biotic and abiotic stress resistance. Mechanistic understanding of the genetic basis of traits, such as N and P use, is allowing rice researchers to engineer nutrient-efficient rice varieties, which would result in higher yields with lower inputs. Likewise, the research in micronutrients biosynthesis opens doors to genetic engineering of metabolic pathways to enhance micronutrients production. With third generation sequencing techniques on the horizon, exciting progress can be expected to vastly improve molecular markers for gene-trait associations forecast with increasing accuracy. This book emphasizes on the areas of rice science that attempt to overcome the foremost limitations in rice production. Our intention is to highlight research advances in the fields of physiology, molecular breeding and genetics, with a special focus on increasing productivity, improving biotic and abiotic stress tolerance and nutritional quality of rice.


Molecular Biology of Rice

Molecular Biology of Rice
Author: Ko Shimamoto
Publisher:
Total Pages: 320
Release: 1999-02
Genre: Nature
ISBN:

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The threat of a food shortage in the 21st century has provided a powerful stimulus for research in the molecular biology of rice, which sustains more than half the world's population. Collaborative work by researchers in Asia, Europe, and North America has brought advances in genome analysis, regulation of gene expression, and transformation and improvement of Oryza sativa. With four major sections, Molecular Biology of Rice is an essential resource for all researchers working on the molecular biology of plants.


Bioinformatics in Rice Research

Bioinformatics in Rice Research
Author: Manoj Kumar Gupta
Publisher: Springer Nature
Total Pages: 609
Release: 2021-09-24
Genre: Science
ISBN: 9811639930

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This book provides an up-to-date review of classic and advanced bioinformatics approaches and their utility in rice research. It summarizes databases and tools for analyzing DNA, proteins and gene expression profiles, mapping genetic variations, annotation of protein and RNA molecules, phylogenetic analysis, and pathway enrichment. In addition, it presents high-throughput technologies that are widely used to provide deep insights into the genetic architecture of important traits in the rice genome. The book subsequently discusses techniques for identifying RNA-protein, DNA-protein interactions, and molecular markers, including SNP and microsatellites, in the contexts of rice breeding and genetics. Lastly, it explores various tools that are used to identify and characterize non-coding RNA in rice and their potential role in rice research.


Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality

Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality
Author: Mohammad Anwar Hossain
Publisher: John Wiley & Sons
Total Pages: 484
Release: 2021-03-22
Genre: Science
ISBN: 1119633117

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Presents the latest knowledge of improving the stress tolerance, yield, and quality of rice crops One of the most important cereal crops, rice provides food to more than half of the world population. Various abiotic stresses—currently impacting an estimated 60% of crop yields—are projected to increase in severity and frequency due to climate change. In light of the threat of global food grain insecurity, interest in molecular rice breeding has intensified in recent years. Progress has been made, but there remains an urgent need to develop stress-tolerant, bio-fortified rice varieties that provide consistent and high-quality yields under both stress and non-stress conditions. Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality is the first book to provide comprehensive and up-to-date coverage of this critical topic, containing the physiological, biochemical, and molecular information required to develop effective engineering strategies for enhancing rice yield. Authoritative and in-depth chapters examine the molecular and genetic bases of abiotic stress tolerance, discuss yield and quality improvement of rice, and explore new approaches to better utilize natural resources through modern breeding. Topics Include rice adaptation to climate change, enriching rice yields under low phosphorus and light intensity, increasing iron, zinc, vitamin and antioxidant content, and improving tolerance to salinity, drought, heat, cold, submergence, heavy metals and Ultraviolet-B radiation. This important resource: Contains the latest scientific information on a wide range of topics central to molecular breeding for rice Provides timely coverage molecular breeding for improving abiotic stress tolerance, bioavailability of essential micronutrients, and crop productivity through biotechnological methods Features detailed chapters written by internationally-recognized experts in the field Discusses recent progress and future directions in molecular breeding strategies and research Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality is required reading for rice researchers, agriculturists, and agribusiness professionals, and the ideal text for instructors and students in molecular plant breeding, abiotic stress tolerance, environmental science, and plant physiology, biochemistry, molecular biology, and biotechnology.


Rice Research for Quality Improvement: Genomics and Genetic Engineering

Rice Research for Quality Improvement: Genomics and Genetic Engineering
Author: Aryadeep Roychoudhury
Publisher: Springer Nature
Total Pages: 777
Release: 2020-10-31
Genre: Technology & Engineering
ISBN: 9811541205

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This book focuses on the conventional breeding approach, and on the latest high-throughput genomics tools and genetic engineering / biotechnological interventions used to improve rice quality. It is the first book to exclusively focus on rice as a major food crop and the application of genomics and genetic engineering approaches to achieve enhanced rice quality in terms of tolerance to various abiotic stresses, resistance to biotic stresses, herbicide resistance, nutritional value, photosynthetic performance, nitrogen use efficiency, and grain yield. The range of topics is quite broad and exhaustive, making the book an essential reference guide for researchers and scientists around the globe who are working in the field of rice genomics and biotechnology. In addition, it provides a road map for rice quality improvement that plant breeders and agriculturists can actively consult to achieve better crop production.


Rice Science: Biotechnological and Molecular Advancements

Rice Science: Biotechnological and Molecular Advancements
Author: Deepak Kumar Verma
Publisher: CRC Press
Total Pages: 354
Release: 2018-12-07
Genre: Science
ISBN: 1351136577

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A significant crop in our global society, rice is a staple food product for over half of the world’s population. New technologies are being researched and utilized for increasing the overall production of strong rice crops throughout the world. This book focuses on the new areas of research on the most recent biotechnological and molecular techniques to aid in this endeavor. The researchers who have contributed to this compendium are international leaders in their respective fields. The original research included in the volume is strengthened through the addition of surveys, reviews, success stories, and other aspects that impact the global agricultural industry.


Rice Genetics IV

Rice Genetics IV
Author: Gurdev S. Khush
Publisher: Int. Rice Res. Inst.
Total Pages: 501
Release: 2001
Genre: Science
ISBN: 157808167X

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Geneticists contribute on a wide range of topics in this book, from classical genetics to the most advanced research on sequencing of the rice genome and functional genomics. They review advances in rice research and discuss molecular markers, genome organization and gene isolation.