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Modeling and Simulation of Capsules and Biological Cells

Modeling and Simulation of Capsules and Biological Cells
Author: C. Pozrikidis
Publisher: CRC Press
Total Pages: 344
Release: 2003-05-28
Genre: Mathematics
ISBN: 0203503953

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In the past three decades, considerable progress has been made in the mathematical analysis, modelling, and simulation of the fluid dynamics of liquid capsules and biological cells, and interest in this area is now at an all-time high. This book features a collection of chapters contributed by acknowledged leaders in the field who explore topics re


Modeling and Simulation of Capsules and Biological Cells

Modeling and Simulation of Capsules and Biological Cells
Author: C. Pozrikidis
Publisher: Chapman and Hall/CRC
Total Pages: 344
Release: 2003-05-28
Genre: Mathematics
ISBN: 9781135440626

Download Modeling and Simulation of Capsules and Biological Cells Book in PDF, ePub and Kindle

In the past three decades, considerable progress has been made in the mathematical analysis, modelling, and simulation of the fluid dynamics of liquid capsules and biological cells, and interest in this area is now at an all-time high. This book features a collection of chapters contributed by acknowledged leaders in the field who explore topics related to the modeling and numerical simulation of capsule fluid dynamics and cell biomechanics. While providing an outstanding overview of the state of the art in selected areas of the subject, the authors also present the results of their own original research. A companion Web site holds useful links and additional information related to the topics discussed.


Biomathematics

Biomathematics
Author: J. C. Misra
Publisher: World Scientific
Total Pages: 525
Release: 2006
Genre: Science
ISBN: 9812774858

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This book on modelling and simulation in biomathematics will be invaluable to researchers who are interested in the emerging areas of the field. Graduate students in related areas as well as lecturers will also find it beneficial. Some of the chapters have been written by distinguished experts in the field. Sample Chapter(s). Chapter 1: Detecting Mosaic Structures in DNA Sequence Alignments (1,349 KB). Contents: Detecting Mosaic Structures in DNA Sequence Alignments (D Husmeier); Application of Statistical Methodology and Model Design to Socio-Behaviour of HIV Transmission (J Oluwoye); A Stochastic Model Incorporating HIV Treatments for a Heterosexual Population: Impact on Threshold Conditions (R J Gallop et al.); Modeling and Identification of the Dynamics of the MF-Influenced Free-Radical Transformations in Lipid-Modeling Substances and Lipids (J Bentsman et al.); Computer Simulation of Self-Reorganization in Biological Cells (D Greenspan); Modelling Biological Gel Contraction by Cells: Consequences of Cell Traction Forces Distribution and Initial Stress (S Ramtani); Peristaltic Transport of Physiological Fluids (J C Misra & S K Pandey); Mathematical Modelling of DNA Knots and Links (J C Misra & S Mukherjee); Using Monodomain Computer Models for the Simulation of Electric Fields During Excitation Spread in Cardiac Tissue (G Plank); Flow in Tubes with Complicated Geometries with Special Application to Blood Flow in Large Arteries (G Jayaraman); Mathematical Modeling in Reproductive Biomedicine (S Sharma & S K Guha); Image Theory and Applications in Bioelectromagnetics (P D Einziger et al.); Dynamics of Humanoid Robots: Geometrical and Topological Duality (V G Ivancevic); The Effects of Body Composition on Energy Expenditure and Weight Dynamics During Hypophagia: A Setpoint Analysis (F P Kozusko); Mathematical Models in Population Dynamics and Ecology (R Diluo); Modelling in Bone Biomechanics (J C Misra & S Samanta). Readership: Graduate students, academic and researchers in biomathematics, mathematical biology, mathematical modeling, biotechnology, biocomputing, biophysics, bioengineering and mechanics."


Computational Hydrodynamics of Capsules and Biological Cells

Computational Hydrodynamics of Capsules and Biological Cells
Author: Constantine Pozrikidis
Publisher: CRC Press
Total Pages: 328
Release: 2010-06-02
Genre: Mathematics
ISBN: 1439820066

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Spanning biological, mathematical, computational, and engineering sciences, computational biofluiddynamics addresses a diverse family of problems involving fluid flow inside and around living organisms, organs, tissue, biological cells, and other biological materials. Computational Hydrodynamics of Capsules and Biological Cells provides a comprehen


Cellular Automaton Modeling of Biological Pattern Formation

Cellular Automaton Modeling of Biological Pattern Formation
Author: Andreas Deutsch
Publisher: Springer Science & Business Media
Total Pages: 331
Release: 2007-12-26
Genre: Science
ISBN: 0817644156

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This book focuses on a challenging application field of cellular automata: pattern formation in biological systems, such as the growth of microorganisms, dynamics of cellular tissue and tumors, and formation of pigment cell patterns. These phenomena, resulting from complex cellular interactions, cannot be deduced solely from experimental analysis, but can be more easily examined using mathematical models, in particular, cellular automaton models. While there are various books treating cellular automaton modeling, this interdisciplinary work is the first one covering biological applications. The book is aimed at researchers, practitioners, and students in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science interested in a cellular automaton approach to biological modeling.


Statistical Modeling and Machine Learning for Molecular Biology

Statistical Modeling and Machine Learning for Molecular Biology
Author: Alan Moses
Publisher: CRC Press
Total Pages: 281
Release: 2017-01-06
Genre: Computers
ISBN: 1482258609

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• Assumes no background in statistics or computers • Covers most major types of molecular biological data • Covers the statistical and machine learning concepts of most practical utility (P-values, clustering, regression, regularization and classification) • Intended for graduate students beginning careers in molecular biology, systems biology, bioengineering and genetics


Introduction to Modeling Biological Cellular Control Systems

Introduction to Modeling Biological Cellular Control Systems
Author: Weijiu Liu
Publisher: Springer Science & Business Media
Total Pages: 275
Release: 2012-04-26
Genre: Mathematics
ISBN: 8847024900

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This textbook contains the essential knowledge in modeling, simulation, analysis, and applications in dealing with biological cellular control systems. In particular, the book shows how to use the law of mass balance and the law of mass action to derive an enzyme kinetic model - the Michaelis-Menten function or the Hill function, how to use a current-voltage relation, Nernst potential equilibrium equation, and Hodgkin and Huxley's models to model an ionic channel or pump, and how to use the law of mass balance to integrate these enzyme or channel models into a complete feedback control system. The book also illustrates how to use data to estimate parameters in a model, how to use MATLAB to solve a model numerically, how to do computer simulations, and how to provide model predictions. Furthermore, the book demonstrates how to conduct a stability and sensitivity analysis on a model.


Biological Computation

Biological Computation
Author: Ehud Lamm
Publisher: CRC Press
Total Pages: 346
Release: 2011-05-25
Genre: Science
ISBN: 1420087959

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The area of biologically inspired computing, or biological computation, involves the development of new, biologically based techniques for solving difficult computational problems. A unified overview of computer science ideas inspired by biology, Biological Computation presents the most fundamental and significant concepts in this area. In the book, students discover that bacteria communicate, that DNA can be used for performing computations, how evolution solves optimization problems, that the way ants organize their nests can be applied to solve clustering problems, and what the human immune system can teach us about protecting computer networks. The authors discuss more biological examples such as these, along with the computational techniques developed from these scenarios. The text focuses on cellular automata, evolutionary computation, neural networks, and molecular computation. Each chapter explores the biological background, describes the computational techniques, gives examples of applications, discusses possible variants of the techniques, and includes exercises and solutions. The authors use the examples and exercises to illustrate key ideas and techniques. Clearly conveying the essence of the major computational approaches in the field, this book brings students to the point where they can either produce a working implementation of the techniques or effectively use one of the many available implementations. Moreover, the techniques discussed reflect fundamental principles that can be applied beyond bio-inspired computing. Supplementary material is available on Dr. Unger's website.


Stochastic Modelling for Systems Biology

Stochastic Modelling for Systems Biology
Author: Darren J. Wilkinson
Publisher: CRC Press
Total Pages: 360
Release: 2011-11-09
Genre: Mathematics
ISBN: 1439837767

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Since the first edition of Stochastic Modelling for Systems Biology, there have been many interesting developments in the use of "likelihood-free" methods of Bayesian inference for complex stochastic models. Re-written to reflect this modern perspective, this second edition covers everything necessary for a good appreciation of stochastic kinetic modelling of biological networks in the systems biology context. Keeping with the spirit of the first edition, all of the new theory is presented in a very informal and intuitive manner, keeping the text as accessible as possible to the widest possible readership. New in the Second Edition All examples have been updated to Systems Biology Markup Language Level 3 All code relating to simulation, analysis, and inference for stochastic kinetic models has been re-written and re-structured in a more modular way An ancillary website provides links, resources, errata, and up-to-date information on installation and use of the associated R package More background material on the theory of Markov processes and stochastic differential equations, providing more substance for mathematically inclined readers Discussion of some of the more advanced concepts relating to stochastic kinetic models, such as random time change representations, Kolmogorov equations, Fokker-Planck equations and the linear noise approximation Simple modelling of "extrinsic" and "intrinsic" noise An effective introduction to the area of stochastic modelling in computational systems biology, this new edition adds additional mathematical detail and computational methods that will provide a stronger foundation for the development of more advanced courses in stochastic biological modelling.


Single-Cell-Based Models in Biology and Medicine

Single-Cell-Based Models in Biology and Medicine
Author: Alexander Anderson
Publisher: Springer Science & Business Media
Total Pages: 346
Release: 2007-08-08
Genre: Mathematics
ISBN: 376438123X

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Aimed at postgraduate students in a variety of biology-related disciplines, this volume presents a collection of mathematical and computational single-cell-based models and their application. The main sections cover four general model groupings: hybrid cellular automata, cellular potts, lattice-free cells, and viscoelastic cells. Each section is introduced by a discussion of the applicability of the particular modelling approach and its advantages and disadvantages, which will make the book suitable for students starting research in mathematical biology as well as scientists modelling multicellular processes.