Magnetic Resonance Imaging Of Short T2 Tissues With Applications For Quantifying Cortical Bone Water And Myelin PDF Download

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Magnetic Resonance Imaging of Short-T2 Tissues with Applications for Quantifying Cortical Bone Water and Myelin

Magnetic Resonance Imaging of Short-T2 Tissues with Applications for Quantifying Cortical Bone Water and Myelin
Author: Cheng Li
Publisher:
Total Pages: 254
Release: 2014
Genre:
ISBN:

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The human body contains a variety of tissue species with short T2 ranging from a few microseconds to hundreds of microseconds. Detection and quantification of these short- T2 species is of considerable clinical and scientific interest. Cortical bone water and myelin are two of the most important tissue constituents. Quantification of cortical bone water concentration allows for indirect estimation of bone pore volume and noninvasive assessment of bone quality. Myelin is essential for the proper functioning of the central nervous system (CNS). Direct assessment of myelin would reveal CNS abnormalities and enhance our understanding of neurological diseases. However, conventional MRI with echo times of several milliseconds or longer is unable to detect these short-lived MR signals. Recent advances in MRI technology and hardware have enabled development of a number of short- T2 imaging techniques, key among which are ultra-short echo time (UTE) imaging, zero echo time (ZTE) imaging, and sweep imaging with Fourier transform (SWIFT). While these pulse sequences are able to detect short- T2 species, they still suffer from signal interference between different T2 tissue constituents, image artifacts and excessive scan time. These are primary technical hurdles for application to whole-body clinical scanners. In this thesis research, new MRI techniques for improving short- T2 tissue imaging have been developed to address these challenges with a focus on direct detection and quantification of cortical bone water and myelin on a clinical MRI scanner. The first focus of this research was to optimize long- T2 suppression in UTE imaging. Saturation and adiabatic RF pulses were designed to achieve maximum long- T2 suppression while maximizing the signal from short- T2 species. The imaging protocols were optimized by Bloch equation simulations and were validated using phantom and in vivo experiments. The results show excellent short- T2 contrast with these optimized pulse sequences. The problem of blurring artifacts resulting from the inhomogeneous excitation profile of the rectangular pulses in ZTE imaging was addressed. The proposed approach involves quadratic phase-modulated RF excitation and iterative solution of an inverse problem formulated from the signal model of ZTE imaging and is shown to effectively remove the image artifacts. Subsequently image acquisition efficiency was improved in order to attain clinically-feasible scan times. To accelerate the acquisition speed in UTE and ZTE imaging, compressed sensing was applied with a hybrid 3D UTE sequence. Further, the pulse sequence and reconstruction procedure were modified to enable anisotropic field-of-view shape conforming to the geometry of the elongated imaged object. These enhanced acquisition techniques were applied to the detection and quantification of cortical bone water. A new biomarker, the suppression ratio (a ratio image derived from two UTE images, one without and the other with long- T2 suppression), was conceived as a surrogate measure of cortical bone porosity. Experimental data suggest the suppression ratio may be a more direct measure of porosity than previously measured total bone water concentration. Lastly, the feasibility of directly detecting and quantifying spatially-resolved myelin concentration with a clinical imager was explored, both theoretically and experimentally. Bloch equation simulations were conducted to investigate the intrinsic image resolution and the fraction of detectable myelin signal under current scanner hardware constraints. The feasibility of quantitative ZTE imaging of myelin extract and lamb spinal cord at 3T was demonstrated. The technological advances achieved in this dissertation research may facilitate translation of short- T2 MRI methods from the laboratory to the clinic.


MRI of Short and Ultrashort-T_2 Tissues

MRI of Short and Ultrashort-T_2 Tissues
Author: Jiang Du
Publisher: Springer Nature
Total Pages: 612
Release: 2023
Genre: Electronic books
ISBN: 3031351975

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Zusammenfassung: This book comprehensively covers ultrashort echo time (UTE), zero echo time (ZTE), and other magnetic resonance imaging (MRI) acquisition techniques for imaging of short and ultrashort-T2 tissues. MRI uses a large magnet and radio waves to generate images of tissues in the body. The MRI signal is characterized by two time constants, spin-lattice relaxation time (T1) which describes how fast the longitudinal magnetization recovers to its initial value after tipping to the transverse plane, and spin-spin relaxation time (T2) which describes how fast the transverse magnetization decays. Conventional MRI techniques have been developed to image and quantify tissues with relatively long T2s. However, the body also contains many tissues and tissue components such as cortical bone, menisci, ligaments, tendons, the osteochondral junction, calcified tissues, lung parenchyma, iron containing tissues, and myelin, which have short or ultrashort-T2s. These tissues are "invisible" with conventional MRI, and their MR and tissue properties are not measurable. UTE and ZTE type sequences resolve these challenges and make these tissues visible and quantifiable. This book first introduces the basic physics of conventional MRI as well as UTE and ZTE type MRI, including radiofrequency excitation, data acquisition, and image reconstruction. A series of contrast mechanisms are then introduced and these provide high resolution, high contrast imaging of short and ultrashort-T2 tissues. A series of quantitative UTE imaging techniques are described for measurement of MR tissue properties (proton density, T1, T2, T2*, T1p,magnetization transfer, susceptibility, perfusion and diffusion). Finally, clinical applications in the musculoskeletal, neurological, pulmonary and cardiovascular systems are described. This is an ideal guide for physicists and radiologists interested in learning more about the use of UTE and ZTE type techniques for MRI of short and ultrashort-T2 tissues


MRI of Tissues with Short T2s or T2*s

MRI of Tissues with Short T2s or T2*s
Author: Graeme M. Bydder
Publisher: John Wiley & Sons
Total Pages: 791
Release: 2012-12-19
Genre: Medical
ISBN: 1118590511

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The content of this volume has been added to eMagRes (formerly Encyclopedia of Magnetic Resonance) - the ultimate online resource for NMR and MRI. Up to now MRI could not be used clinically for imaging fine structures of bones or muscles. Since the late 1990s however, the scene has changed dramatically. In particular, Graeme Bydder and his many collaborators have demonstrated the possibility – and importance – of imaging structures in the body that were previously regarded as being “MR Invisible”. The images obtained with a variety of these newly developed methods exhibit complex contrast, resulting in a new quality of images for a wide range of new applications. This Handbook is designed to enable the radiology community to begin their assessment of how best to exploit these new capabilities. It is organised in four major sections – the first of which, after an Introduction, deals with the basic science underlying the rest of the contents of the Handbook. The second, larger, section describes the techniques which are used in recovering the short T2 and T2* data from which the images are reconstructed. The third and fourth sections present a range of applications of the methods described earlier. The third section deals with pre-clinical uses and studies, while the final section describes a range of clinical applications. It is this last section that will surely have the biggest impact on the development in the next few years as the huge promise of Short T2 and T2* Imaging will be exploited to the benefit of patients. In many instances, the authors of an article are the only research group who have published on the topic they describe. This demonstrates that this Handbook presents a range of methods and applications with a huge potential for future developments. About EMR Handbooks / eMagRes Handbooks The Encyclopedia of Magnetic Resonance (up to 2012) and eMagRes (from 2013 onward) publish a wide range of online articles on all aspects of magnetic resonance in physics, chemistry, biology and medicine. The existence of this large number of articles, written by experts in various fields, is enabling the publication of a series of EMR Handbooks / eMagRes Handbooks on specific areas of NMR and MRI. The chapters of each of these handbooks will comprise a carefully chosen selection of articles from eMagRes. In consultation with the eMagRes Editorial Board, the EMR Handbooks / eMagRes Handbooks are coherently planned in advance by specially-selected Editors, and new articles are written (together with updates of some already existing articles) to give appropriate complete coverage. The handbooks are intended to be of value and interest to research students, postdoctoral fellows and other researchers learning about the scientific area in question and undertaking relevant experiments, whether in academia or industry. Have the content of this Handbook and the complete content of eMagRes at your fingertips! Visit: www.wileyonlinelibrary.com/ref/eMagRes View other eMagRes publications here


Quantitative Magnetic Resonance Imaging

Quantitative Magnetic Resonance Imaging
Author: Nicole Seiberlich
Publisher: Academic Press
Total Pages: 1094
Release: 2020-11-18
Genre: Computers
ISBN: 0128170581

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Quantitative Magnetic Resonance Imaging is a ‘go-to’ reference for methods and applications of quantitative magnetic resonance imaging, with specific sections on Relaxometry, Perfusion, and Diffusion. Each section will start with an explanation of the basic techniques for mapping the tissue property in question, including a description of the challenges that arise when using these basic approaches. For properties which can be measured in multiple ways, each of these basic methods will be described in separate chapters. Following the basics, a chapter in each section presents more advanced and recently proposed techniques for quantitative tissue property mapping, with a concluding chapter on clinical applications. The reader will learn: The basic physics behind tissue property mapping How to implement basic pulse sequences for the quantitative measurement of tissue properties The strengths and limitations to the basic and more rapid methods for mapping the magnetic relaxation properties T1, T2, and T2* The pros and cons for different approaches to mapping perfusion The methods of Diffusion-weighted imaging and how this approach can be used to generate diffusion tensor maps and more complex representations of diffusion How flow, magneto-electric tissue property, fat fraction, exchange, elastography, and temperature mapping are performed How fast imaging approaches including parallel imaging, compressed sensing, and Magnetic Resonance Fingerprinting can be used to accelerate or improve tissue property mapping schemes How tissue property mapping is used clinically in different organs Structured to cater for MRI researchers and graduate students with a wide variety of backgrounds Explains basic methods for quantitatively measuring tissue properties with MRI - including T1, T2, perfusion, diffusion, fat and iron fraction, elastography, flow, susceptibility - enabling the implementation of pulse sequences to perform measurements Shows the limitations of the techniques and explains the challenges to the clinical adoption of these traditional methods, presenting the latest research in rapid quantitative imaging which has the possibility to tackle these challenges Each section contains a chapter explaining the basics of novel ideas for quantitative mapping, such as compressed sensing and Magnetic Resonance Fingerprinting-based approaches


Magnetic Resonance Imaging of Bone and Soft Tissue Tumors and Their Mimics

Magnetic Resonance Imaging of Bone and Soft Tissue Tumors and Their Mimics
Author: A.M.A. de Schepper
Publisher: Springer Science & Business Media
Total Pages: 123
Release: 2012-12-06
Genre: Medical
ISBN: 9400909977

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Magnetic resonance imaging has already become a most valuable imaging modality in the diagnostic work-up of musculoskeletal neoplasms. While high accuracy of MRI for staging purposes has been proven, we will focus in this monograph on the characterization of primary bone and soft tissue tumors by MRI. The major purpose of this monograph is to provide an atlas of magnetic resonance features of primary bone and soft tissue tumors for radiologists, orthopedic surgeons and physiotherapists. The results presented are based on investigations of 94 primary bone and soft tissue tumors and mimicking conditions by magnetic resonance imaging. Although the scale of the material allows for statistical handling, the number of patients per subgroup is too small to come to definite conclusions. We will therefore limit ourselves to the description of and comments on a great number of cases to illustrate the diagnostic potential of this new imaging modality. We would like to thank the anonymous cooperators: referring clinicians, pathologists, nurses, technicians and secretaries whose help enabled us to present this monograph. We would also like to express our gratitude to the firms Siemens AG and Schering AG for technical support.


Simultaneous Quantitative Multiparametric MRI for In Vivo Tissue Characterization Using Magnetic Resonance Multitasking: Methodology and Clinical Experience

Simultaneous Quantitative Multiparametric MRI for In Vivo Tissue Characterization Using Magnetic Resonance Multitasking: Methodology and Clinical Experience
Author: Sen Ma
Publisher:
Total Pages: 194
Release: 2020
Genre:
ISBN:

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In current clinical systems, magnetic resonance imaging scans for disease diagnosis and prognosis are dominated by qualitative contrast-weighted imaging. These qualitative MR images reveal regional differences in signal intensities between tissues with focal structural or functional abnormalities and tissues that are supposedly in healthy states, facilitating subjective determination for disease diagnosis. The administration of gadolinium-based contrast agents is prevalent in clinical MRI exams, which alternates the relaxation time of neighboring water protons and creates enhanced signal intensities from damaged tissues with high vascular density and thin vessel wall for better visualization. Nowadays, nearly 50% of the MRI studies were conducted with contrast agents. However, patients with renal insufficiency are at risk of developing nephrogenic system fibrosis if exposed to gadolinium-based contrast agents, and chronic toxic effects of possible gadolinium retention have been reported. In the meantime, qualitative contrast-weighted images have limited sensitivity to subtle alteration in tissue states, lack of biological specificity and multi-center reproducibility, and limited predictive values. One promising alternative is quantitative multiparametric MRI, which contains various methods to quantify multiple parameters with interpretable physical units that are intrinsic to tissue properties. Most of these quantitative approaches do not involve the administration of contrast agents, therefore ensuring the safety of the application to a wide range of patients and reducing the costs of MRI. These quantitative parameters are highly reproducible, sensitive to subtle physiological tissue changes, and specific for disease pathologies. More importantly, each of these parameters reveal tissue properties in different aspects, having the potential to offer complementary information for comprehensive tissue characterization, and acting as biomarkers that are directly associated with diseases states. Despite the benefits to clinical studies, quantitative multiparametric MRI has yet to be widely adopted in routine clinical practices because of several major technical limitations including (i) long scan times that compromises image resolution and/or spatial coverage, (ii) motion artifacts, (iii) misaligned parametric maps due to separate acquisitions, and (iv) complicated clinical workflow. This dissertation aims to address some of these challenges by proposing a simultaneous quantitative multiparametric MRI approach with Magnetic Resonance Multitasking and focus on the quantification of T1, T2, T1 , and ADC, which serves as the start of the ultimate goal to provide a clinically translatable, multiparametric whole-body quantitative tissue characterization technique. A novel approach to simultaneously quantifying T1, T2, and ADC in the brain was first developed using MR Multitasking in conjunction with a time-resolved phase correction strategy to compensate for the inter-shot phase inconsistencies introduced by physiological motion. It was implemented as a push-button, continuous acquisition that simplified the workflow. This technique was initially demonstrated in healthy subjects to efficiently produce distortion-free, co-registered T1, T2, and ADC maps with 3D brain coverage (100mm) in 9.3min. The resulting T1, T2, and ADC measurements in the brain were comparable to reference quantitative approaches. Abrupt motion was manually identified and removed to yield T1, T2, and ADC maps that were free from motion artifacts and with accurate quantitative measurements. Clinical feasibility was demonstrated on post-surgery glioblastoma patients. A motion-resolved, simultaneous T1, T2, and T1 quantification technique was then developed using MR Multitasking in a push-button 9min acquisition. Rigid intra-scan head motion was captured and simultaneously resolved along with the relaxation processes. This technique was first validated in healthy subjects to produce high quality, whole-brain (140mm) T1, T2, and T1 maps and repeatable T1, T2, and T1 measurements that were in excellent agreement with gold standard methods. Motion-resolved, artifact-free maps were generated under either in-plane or through-plane motion, which provided a novel avenue for handling rigid motion in brain MRI. Synthetic contrast-weighted qualitative images comparable to clinical images were generated using the parameter maps, demonstrating the significant potential to replace conventional MRI scans with a single Multitasking scan for clinical purposes. This technique was applied in a pilot clinical setting to perform tissue characterization in relapsing-remitting multiple sclerosis patients. The combination of T1, T2, and T1 significantly improved the accuracy of the differentiation of multiple sclerosis patients from healthy controls, compared to either single parameter alone, indicating the clinical utility of T1, T2, and T1 as quantitative biomarkers. Lastly, the above two quantitative techniques were extended to other body organs for a preliminary demonstration of potential applications, where we 1) simultaneously quantified T1, T2, and ADC in the breast with whole-breast coverage (160mm) in 8min, incorporating a B1+-compensated multiparametric fitting approach to address the notable B1+ inhomogeneity across the bilateral breast FOV, and to provide distortion-free, co-registered whole-breast T1, T2, and ADC maps with good in vivo repeatability; and 2) simultaneously quantified myocardial T1 and T1 in a single non-ECG, free-breathing acquisition, where cardiac motion and respiratory motion were retrospectively identified and simultaneously resolved to produce dynamic myocardial T1 and T1 maps of 20 cardiac phases with high temporal resolution (15ms) in a single, continuous acquisition of 1.5min per slice. Multitasking T1 and T1 measurements in the heart were comparable with gold standard techniques.


Application-specific Optimization of Quantitative Susceptibility Mapping for Clinical Imaging

Application-specific Optimization of Quantitative Susceptibility Mapping for Clinical Imaging
Author: Alexey Victorovich Dimov
Publisher:
Total Pages: 236
Release: 2017
Genre:
ISBN:

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Magnetic resonance imaging (MRI) is a noninvasive clinical imaging modality with very rich contrasts based on the physical properties of the imaged tissues. MRI can be used for quantification of volumetric distributions of various biomolecules and chemical elements - such as triglycerides, calcium and iron - that regarded as participants in normal tissue biochemistry, and whose dysregulations are often manifested in pathologic processes. This dissertation reports optimization steps undertaken to overcome technical challenges in quantitative susceptibility mapping (QSM) in different parts of human body. Often in QSM it is assumed that susceptibility is the only contributor to the observed field inhomogeneity, which may be a valid assumption for neuroimaging applications. However, multiple molecules found in biological tissues (e.g., triglycerides of fat) have a resonance frequency different from that of water, and this resonance frequency offset is referred to as chemical shift. This chemical shift affects the phase of the MRI signal. Although ways to estimate field inhomogeneity in the presence of chemical shift have been proposed, they often rely on the a priori knowledge of the chemical spectrum. Unfortunately, variability of chemical spectra have been reported. In this dissertation, an automated joint estimation of the chemical shift and the susceptibility from an MRI dataset is reported, where the chemical shift is also treated as an unknown variable subject to optimization. QSM may become a useful diagnostic tool for noninvasive assessment of bone health without the use of ionizing radiation, however this application has been a challenging task challenging because QSM requires complete measurements of phase everywhere within the region of interest, and cortical bone typically has very low or no signal at conventional echo times in gradient echo (GRE) imaging. An additional problem arises from intermingling of fat and water protons in the bone marrow, necessitating the application of water–fat separation techniques for field mapping. In this dissertation, a novel signal model is proposed, feasibility of using QSM for measuring bone MRI signal is investigated, and the inherent technical issues involved in this application are highlighted. QSM has been widely applied in neuroimaging. In particular, due to its ability to accurately map iron deposits in deep brain nuclei, QSM promises precise targeting of the subthalamic nucleus (STN) in deep brain stimulation surgery (DBS). This dissertation reports results of comparison between QSM and standard-of-care T2w imaging of the STN, and their performance in high-resolution presugrical anatomic imaging.


Thermal Denaturation of Tissues

Thermal Denaturation of Tissues
Author: Sangeetha B. Rao
Publisher:
Total Pages: 121
Release: 1996
Genre: Magnetic resonance imaging
ISBN:

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