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Mechanics of Motor Proteins and the Cytoskeleton

Mechanics of Motor Proteins and the Cytoskeleton
Author: Jonathon Howard
Publisher: Sinauer
Total Pages: 0
Release: 2005-12-06
Genre: Science
ISBN: 9780878933334

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Mechanics of Motor Proteins and the Cytoskeleton provides a physical foundation for molecular mechanics. Part I explains how small particles like proteins respond to mechanical, thermal, and chemical forces, Part II focuses on cytoskeletal filaments, and Part III focuses on motor proteins. The treatments are unified in the respect that they are organized around principles rather than proteins: chapters are centred on topics such as structure, chemistry, and mechanics, and different filaments or motors are discussed together.


Molecular Biology of The Cell

Molecular Biology of The Cell
Author: Bruce Alberts
Publisher:
Total Pages: 0
Release: 2002
Genre: Cytology
ISBN: 9780815332183

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Microtubule-based Regulation of Vesicular Transport

Microtubule-based Regulation of Vesicular Transport
Author: Linda Balabanian
Publisher:
Total Pages:
Release: 2021
Genre:
ISBN:

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"Motor proteins kinesins and dynein are mechanoenzymes that catalyze ATP hydrolysis to take successive steps on microtubule filaments, while transporting organelles to their destinations. How do motor proteins efficiently navigate specific microtubule tracks to sort cargoes? The microtubule cytoskeleton regulates the trafficking and sorting of vesicles through interactions with microtubule-associated proteins, tubulin post-translational modifications and network organization. The impairment of transport causes neurodegenerative disease. The interplay of the microtubule-based regulatory factors poses challenges in understanding the regulation of intracellular transport and contributes to apparent discrepancies between studies in live cells and reconstituted in vitro systems. In my thesis, we address such regulatory mechanisms that modulate the efficient transport of cargoes on the microtubule network. Acetylated microtubules, abundant in neuronal axons and central regions of fibroblasts, constitute the preferred tracks for kinesin-1 motors. However, microtubule acetylation does not influence kinesin-1 motility in purified systems, suggesting that regulatory factors other than this post-translational modification contribute to the motor's track selection. We isolated intact microtubule networks from fibroblasts to conduct motility assays of purified kinesin-1. With this approach bridging live cell studies and reconstituted systems, we demonstrate that although tubulin acetylation does not directly impact kinesin-1 binding or motility, it is highly correlated with microtubule bundling, which leads to longer kinesin-1 run lengths. We expect that the higher local density of microtubules within bundles allows for rapid kinesin-1 re-attachment upon unbinding, extending the total displacement. We also investigated the role of neuronal microtubule-associated protein tau, which normally bundles acetylated axonal microtubules. Several studies show that tau strongly inhibits kinesin-1 in vitro, although paradoxically kinesin-1 driven transport is highly efficient on tau-decorated microtubules in neurons. We found that inhibition of kinesin-1 by tau is not affected by either microtubule acetylation or bundling on the isolated microtubule networks. This led us to further investigate how motor proteins can navigate tau-associated microtubules in fibroblasts, which do not endogenously express tau. As tau phosphorylation modulates tau's diffusivity on microtubules, we investigated the effects of wild-type (WT) tau (non-phosphorylated) and phosphomimetic tau (at Y18) on the motility of different organelles. We found that phosphomimetic tau does not inhibit the motility of centrally positioned lysosomes, whereas WT tau reduces the processivity of peripheral and central lysosomes similarly, as shown by mean squared displacement and radius of gyration measurements of their trajectories. Early endosomes are more sensitive to inhibition by both WT and phosphomimetic tau. Our model suggests that tau phosphorylation does not inhibit lysosomes that are driven by kinesin-1 on acetylated microtubule bundles, in contrast to the inhibition of kinesin-3 mediated transport in the periphery"--


Microtubules, in vitro

Microtubules, in vitro
Author: John J. Correia
Publisher: Academic Press
Total Pages: 472
Release: 2013-08-20
Genre: Science
ISBN: 0124078885

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There continues to be intense interest in the microtubule cytoskeleton; the assembly, structure and regulation of microtubules; and the numerous motors and accessory proteins that control cell cycle, dynamics, organization and transport. The field continues to grow and explore new aspects of these issues driven immensely by developments in optical imaging and tracking techniques. This Second Edition brings together current research and protocols in the field of microtubules in vitro and will serve as a valuable tool for cell biologists, biophysicists and pharmacologists who study the microtubule cytoskeleton, as well as for researchers in the biomedical and biotechnology communities with interest in developing drugs that target microtubules, MAPS and motors. Chapters reflect experimental procedures and new developments in the field of microtubule in vitro research Combines classical approaches and modern technologies Presents easy-to-use protocols and thorough background information, compiled by leaders in the field


World Malaria Report 2018

World Malaria Report 2018
Author: World Health Organization
Publisher: World Health Organization
Total Pages: 210
Release: 2019-02-12
Genre: Medical
ISBN: 9241565659

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This year s report shows that after an unprecedented period of success in global malaria control progress has stalled. Data from 2015?2017 highlight that no significant progress in reducing global malaria cases was made in this period. There were an estimated 219 million cases and 435 000 related deaths in 2017. The World malaria report 2018 draws on data from 90 countries and areas with ongoing malaria transmission. The information is supplemented by data from national household surveys and databases held by other organizations.


Kinesins and Cancer

Kinesins and Cancer
Author: Frank Kozielski, FSB
Publisher: Springer
Total Pages: 276
Release: 2015-03-02
Genre: Medical
ISBN: 9401797323

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This interdisciplinary volume collates research work on kinesins and cancer. Authors attempt to validate members of the kinesin superfamily as potential targets for drug development in cancer chemotherapy. The work begins by highlighting the importance of kinesins, summarising current knowledge and how they are shown to be crucial for mitosis. Chapters go on to explore how this family of proteins are emerging as a novel target for chemotherapeutic intervention and drug development. Readers will learn how kinesins travel along microtubules to fulfill their many roles in intracellular transport or cell division. Several compounds that inhibit two mitotic kinesins (called Eg5 and CENP-E) have entered Phase I and II clinical trials and are explored in these chapters. Additional mitotic kinesins are currently being validated as drug targets, raising the possibility that the repertoire of kinesin-based drug targets may expand in the future. The book is suitable as a reference standard for the field of kinesins and cancer. It will interest those in academia and pharmaceutical companies, and anyone with an interest in the medical relevance of these proteins, which cutting edge methodologies are now enabling us to understand in astonishing detail.


Out-of-Equilibrium (Supra)molecular Systems and Materials

Out-of-Equilibrium (Supra)molecular Systems and Materials
Author: Nicolas Giuseppone
Publisher: John Wiley & Sons
Total Pages: 448
Release: 2021-03-30
Genre: Science
ISBN: 3527821988

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A must-have resource that covers everything from out-of-equilibrium chemical systems and materials to dissipative self-assemblies Out-of-Equilibrium Supramolecular Systems and Materials presents a comprehensive overview of the synthetic approaches that use supramolecular bonds in various out-of-thermodynamic equilibrium situations. With contributions from noted experts on the topic, the text contains information on the design of dissipative self-assemblies that maintain their structures when fueled by an external source of energy. The contributors also examine molecules and nanoscale objects and materials that can produce mechanical work based on molecular machines. Additionally, the book explores non-equilibrium supramolecular polymers that can be trapped in kinetically stable states, as well as out-of-equilibrium chemical systems and oscillators that are important to understand the emergence of complex behaviors and, in particular, the origin of life. This important book: Offers comprehensive coverage of fields from design of dissipative self-assemblies to non-equilibrium supramolecular polymers Presents information on a highly emerging and interdisciplinary topic Includes contributions from internationally renowned scientists Written for chemists, physical chemists, biochemists, material scientists, Out-of-Equilibrium Supramolecular Systems and Materials is an indispensable resource written by top scientists in the field.


Cilia and Flagella

Cilia and Flagella
Author:
Publisher: Academic Press
Total Pages: 643
Release: 1995-08-31
Genre: Science
ISBN: 0080859453

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Cilia and Flagella presents protocols accessible to all individuals working with eukaryotic cilia and flagella. These recipes delineate laboratory methods and reagents, as well as critical steps and pitfalls of the procedures. The volume covers the roles of cilia and flagella in cell assembly and motility, the cell cycle, cell-cell recognition and other sensory functions, as well as human diseases and disorders. Students, researchers, professors, and clinicians should find the book's combination of "classic" and innovative techniques essential to the study of cilia and flagella. Key Features* A complete guide containing more than 80 concise technical chapters friendly to both the novice and experienced researcher* Covers protocols for cilia and flagella across systems and species from Chlamydomonas and Euglena to mammals* Both classic and state-of-the-art methods readily adaptable across model systems, and designed to last the test of time, including microscopy, electrophoresis, and PCR* Relevant to clinicians interested in respiratory disease, male infertility, and other syndromes, who need to learn biochemical, molecular, and genetic approaches to studying cilia, flagella, and related structures


Single Molecule Analysis

Single Molecule Analysis
Author: Erwin J. G. Peterman
Publisher: Humana Press
Total Pages: 317
Release: 2011-09-15
Genre: Science
ISBN: 9781617792816

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Life scientists believe that life is driven, directed, and shaped by biomolecules working on their own or in concert. It is only in the last few decades that technological breakthroughs in sensitive fluorescence microscopy and single-molecule manipulation techniques have made it possible to observe and manipulate single biomolecules and measure their individual properties. The methodologies presented in Single Molecule Techniques: Methods and Protocols are being applied more and more to the study of biologically relevant molecules, such as DNA, DNA-binding proteins, and motor proteins, and are becoming commonplace in molecular biophysics, biochemistry, and molecular and cell biology. The aim of Single Molecule Techniques: Methods and Protocols is to provide a broad overview of single-molecule approaches applied to biomolecules on the basis of clear and concise protocols, including a solid introduction to the most widely used single-molecule techniques, such as optical tweezers, single-molecule fluorescence tools, atomic force microscopy, magnetic tweezers, and tethered particle motion. Written in the highly successful Methods in Molecular BiologyTM series format, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and accessible, Single Molecule Techniques: Methods and Protocols serves as an ideal guide to scientists of all backgrounds and provides a broad and thorough overview of the exciting and still-emerging field of single-molecule biology.