Ecological Interactions And Phylogenetics Of Desmognathine Salamanders Caudata Plethodontidae Across The Eastern Continental Divide PDF Download

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The Biology of Plethodontid Salamanders

The Biology of Plethodontid Salamanders
Author: Richard C. Bruce
Publisher: Springer Science & Business Media
Total Pages: 484
Release: 2012-12-06
Genre: Science
ISBN: 1461542553

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This volume offers a state-of-the-art overview of plethodontid salamanders. Readers will find the best current understanding of many aspects of the evolution, systematics, development, morphology, life history, ecology, and field methodology of these animals.


Behavioral Ecology of the Eastern Red-backed Salamander

Behavioral Ecology of the Eastern Red-backed Salamander
Author: Robert G. Jaeger
Publisher: Oxford University Press
Total Pages: 249
Release: 2016-08-04
Genre: Science
ISBN: 0190605510

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The small, terrestrial eastern red-backed salamander is abundant on many forest floors of northeastern North America. Dr. Robert Jaeger and many of his graduate students spent over 50 years studying this species in New York and Virginia, using ecological techniques in forests and behavioral experiments in laboratory chambers in an attempt to understand how this species interacts with other species in the forest and the components of its intra- and intersexual social behaviors. The competitive and social behaviors of this species are unusually complex for an amphibian. This species is highly aggressive towards other similar-size species where they cohabit in forests, often leading to very little geographic overlap between the species. The authors examine the fascinating behavioral traits of this species including social monogamy, mutual mate guarding, sexual coercion, inter-species communication, and conflict resolution.


Towards Rectifying Limitations on Species Delineation in Dusky Salamanders (Desmognathus:Plethodontidae)

Towards Rectifying Limitations on Species Delineation in Dusky Salamanders (Desmognathus:Plethodontidae)
Author: David A. Beamer
Publisher:
Total Pages: 61
Release: 2020
Genre:
ISBN: 9781776708734

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"Abstract: Dusky salamanders (Desmognathus) constitute a large, species-rich group within the family Plethodontidae, and though their systematic relationships have been addressed extensively, most studies have centered on particular species complexes and therefore offer only piecemeal phylogenetic perspective on the genus. Recent work has revealed Desmognathus to be far more clade rich--35 reciprocally monophyletic clades versus 22 recognized species--than previously imagined, results that, in turn, provide impetus for additional survey effort within clades and across geographic areas thus far sparsely sampled. We conceived and implemented a sampling regime combining level IV ecoregions and independent river drainages to yield a geographic grid for comprehensive recovery of all genealogically exclusive clades. We sampled over 550 populations throughout the distribution of Desmognathus in the eastern United States of America and generated mitochondrial DNA sequence data (mtDNA; 1,991 bp) for 536 specimens. A Bayesian phylogenetic reconstruction of the resulting haplotypes revealed forty-five reciprocally monophyletic clades, eleven of which have never been included in a comprehensive phylogenetic reconstruction, and an additional three not represented in any molecular systematic survey. Although general limitations associated with mtDNA data preclude new species delineation, we profile each of the 45 clades and assign names to 10 new clades (following a protocol for previous clade nomenclature). We also redefine several species complexes and erect new informal species complexes. Our dataset, which contains topotypic samples for nearly every currently recognized species and most synonymies, will offer a robust framework for future efforts to delimit species within Desmognathus. Keywords: Amphibia, Caudata, Desmognathus, mtDNA phylogeny, level IV ecoregion X independent drainage sampling, new clades"--Page 3.


Phylogeographic and Phylogenetic Exploration of Plethodon (Plethodontidae, Caudata) Salamanders in the Pacific Northwest

Phylogeographic and Phylogenetic Exploration of Plethodon (Plethodontidae, Caudata) Salamanders in the Pacific Northwest
Author:
Publisher:
Total Pages: 99
Release: 2009
Genre: Salamanders
ISBN:

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Genetic studies of amphibians often reveal substantial population structure due to either historical demographics from changing climate and geographic features over varying timeframes. Eight species of terrestrial salamanders (Family: Plethodontidae, Genus: Plethodon) reside in forests of the Pacific Northwest (PNW). Plethodon vehiculum is the most widespread and abundant terrestrial salamander in the PNW yet evolutionary studies are lacking. Using mitochondrial DNA (mtDNA) sequence data (D-loop and cytb) questions regarding the phylogeography of P. vehiculum and phylogenetics of western Plethodons are explored. Two major clades were defined in P. vehiculum, a southern clade in the Klamath-Siskiyou region and a northern clade ranging from northern Oregon to British Columbia using parsimony and maximum likelihood trees and a haplotype network. High divergence levels between the north and south clades are observed warranting further investigation into the southern clade's unique evolutionary trajectory. The northern populations were not highly differentiated with high levels of haplotype sharing, not common in other terrestrial salamander species. A large recent range expansion or high habitat connectivity for these salamanders is suggested. The Columbia River did not act as barrier to dispersal in this species, however, Vancouver Island and the population of Washington's Olympic Peninsula revealed unique haplotypes only to those areas, due to the presence of geographic barriers to dispersal and/or multiple glacial refugia. The D-loop and cytb provided evidence for recent range expansion in the northern clade. This was the first study to incorporate all western Plethodon salamanders in a phylogenetic study. Parsimony and maximum likelihood methods offered strong support for recognized relationships among western Plethodons, however relationships between the major groups remain unhighly supported. Lack of genetic diversity in the mtDNA cytb gene in P. vehiculum is highly inconsistent with other Plethodon salamanders and highlights the importance of understanding mtDNA evolution in ectotherms. Divergence measures were used to estimate divergence times among species, dating all speciation before the Pleistocene glaciations. The southern OR clade of P. vehiculum was dated to have been separated from the northern clade at the start of the Pleistocene. The deep phylogeographic break here justifies the possibility of reclassification of the southern clade.


Ecology and Genetics of Lungless Salamanders (Family Plethodontidae) in the Gulf Coastal Plain

Ecology and Genetics of Lungless Salamanders (Family Plethodontidae) in the Gulf Coastal Plain
Author: Jennifer Yasmin Lamb
Publisher:
Total Pages:
Release: 2016
Genre: Lungless salamanders
ISBN:

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During the last half century, lungless salamanders (Family Plethodontidae) have been the subject of numerous studies in the fields of ecology and genetics. While most works have focused on the species-rich Eastern Highlands region, there has been a recent shift towards plethodontid assemblages within the Coastal Plain. The research presented herein applies hierarchical occupancy models and both mitochondrial and nuclear genes to address questions pertinent to the biology and conservation of plethodontids within the Gulf Coastal Plain. The results of a multi-species Bayesian single-season occupancy model indicated that two environmental gradients, upstream drainage area and stream drying, influenced the probability of occurrence for multiple species of stream-breeding plethodontids. Further, species varied in their responses to these gradients. A second model was used to ask whether asymmetric interactions also influenced occurrence for three species of brook salamanders (Genus Eurycea). More specifically, the model tested whether the southern two-lined salamander (E. cirrigera) might act as the dominant predator and or competitor to either the three-lined (E. guttolineata) or dwarf (E. quadridigitata) salamanders. The results of this second model suggested that environmental gradients likely work in tandem with negative interactions to shape the distribution of E. guttolienata within the Gulf Coastal Plain. Like hierarchical occupancy models, genetic tools are also shedding light on complex relationships among and within species of lungless salamanders. This research investigated phylogeographic patterns within a wide-ranging species of plethodontid, the spotted dusky salamander (Desmognathus conanti). Sequence data revealed that there were geographically discrete, deeply divergent mitochondrial lineages within D. conanti which may be the result of isolation brought about by fluctuating sea levels during the late Miocene through the Pleistocene. Data from six rapidly mutating microsatellite markers indicated that there had been recent gene flow across some of these lineages in the southern Gulf Coastal Plain. However, these data also suggest that a northern lineage may have remained distinct. The relationships described and occurrence probabilities estimated by the aforementioned models, in combination with conclusions from analyses of genetic data, improve our ability to conserve regional plethodontid biodiversity within this unique physiographic province.


Parasite Communities: Patterns and Processes

Parasite Communities: Patterns and Processes
Author: Gerald W. Esch
Publisher: Springer Science & Business Media
Total Pages: 397
Release: 2012-12-06
Genre: Science
ISBN: 9400908377

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We first discussed the possibility of organizing a symposium on helminth communities in June, 1986. At that time, we were engaged in writing a joint paper on potential structuring mechanisms in helminth communities; we disagreed on a number of issues. We felt the reason for such debate was because the discipline was in a great state of flux, with many new concepts and approaches being introduced with increasing frequency. After consider able discussion about the need, scope and the inevitable limitations of such a symposium, we decided that the time was ripe to bring other ecologists, engaged in similar research, face-to-face. There were many individuals from whom to choose; we selected those who were actively publishing on helminth communities or those who had expertise in areas which we felt were particularly appropriate. We compiled a list of potential participants, contacted them and received unanimous support to organize such a symposium. Our intent was to cover several broad areas, fully recognizing that breadth negates depth (at least with a publisher's limitation on the number of pages). We felt it important to consider patterns amongst different kinds of hosts because this is where we had disagreed among ourselves.


Brief History of Herpetology in the Museum of Vertebrate Zoology, University of California, Berkeley, with a List of Type Specimens of Recent Amphibians and Reptiles

Brief History of Herpetology in the Museum of Vertebrate Zoology, University of California, Berkeley, with a List of Type Specimens of Recent Amphibians and Reptiles
Author: Javier A. Rodriguez-Robles
Publisher: Univ of California Press
Total Pages: 137
Release: 2003-01-01
Genre: Science
ISBN: 0520930002

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The Museum of Vertebrate Zoology (MVZ), located on the campus of the University of California, Berkeley, is a leading center of herpetological research in the United States. This monograph offers a brief account of the principal figures associated with the collection and of the most important events in the history of herpetology in the MVZ during its first 93 years, and lists all type specimens of recent amphibians and nonavian reptiles in the collection. Although the MVZ has existed since 1908, until 1945 there was no formal curator for the collection of amphibians and nonavian reptiles. Since that time Robert C. Stebbins, David B. Wake, Harry W. Greene, Javier A. Rodríguez-Robles (in an interim capacity), and Craig Moritz have served in that position. The herpetological collection of the MVZ was begun on March 13, 1909, with a collection of approximately 430 specimens from southern California and as of December 31, 2001, contained 232,254 specimens. Taxonomically, the collection is strongest in salamanders, accounting for 99,176 specimens, followed by "lizards" (squamate reptiles other than snakes and amphisbaenians, 63,439), frogs (40,563), snakes (24,937), turtles (2,643), caecilians (979), amphisbaenians (451), crocodilians (63), and tuataras (3). Whereas the collection's emphasis historically has been on the western United States and on California in particular, representatives of taxa from many other parts of the world are present. The 1,765 type specimens in the MVZ comprise 120 holotypes, three neotypes, three syntypes, and 1,639 paratopotypes and paratypes; 83 of the holotypes were originally described as full species. Of the 196 amphibian and nonavian reptilian taxa represented by type material, most were collected in México (63) and California (USA, 54). The Appendix of the monograph presents a list of curators, graduate and undergraduate students, postdoctoral fellows, research associates, research assistants, curatorial associates, curatorial assistants, and visiting faculty who have conducted research on the biology of amphibians and reptiles while in residence in the Museum of Vertebrate Zoology as of December 31, 2001.