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Coho Salmon (Oncorhynchus Kisutch) Dispersal and Life History Variations Among Humboldt Bay Watersheds

Coho Salmon (Oncorhynchus Kisutch) Dispersal and Life History Variations Among Humboldt Bay Watersheds
Author: Madison J. Halloran
Publisher:
Total Pages: 74
Release: 2020
Genre: Coho salmon
ISBN:

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I developed a multi-state model structure to estimate the probability of individuals moving among watersheds while accounting for survival and imperfect detection, but parameter estimates from the global model were unreliable due to small sample size and violations of mark-recapture assumptions. A reduced model with fewer parameters provided more reliable estimates. Apparent survival in the second interval of the most parsimonious reduced model was 47.5% in 2017-18 and 29.5% in 2018-19. The reduced model estimated that


Historical and Current Presence-absence of Coho Salmon (Oncorhynchus Kisutch) in the Central California Coast Evolutionary Significant Unit

Historical and Current Presence-absence of Coho Salmon (Oncorhynchus Kisutch) in the Central California Coast Evolutionary Significant Unit
Author: Peter Burton Adams
Publisher:
Total Pages: 36
Release: 1999
Genre: Coho salmon
ISBN:

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"This report is a summary of the presence and absence of coho salmon, Oncorhynchus kisutch, in streams in the Central California Coast Evolutionary Significant Unit (ESU). Only streams with historical records of coho occupancy are considered. It has been prepared to assist in Endangered Species Act activities... Presence absence data used here come from surveys conducted for this study and fron data collected by other researchers. A preliminary report of this data, which included only approximately one-half of these streams, was published earlier... to meet earlier listing requirements."--p.Abstract.


Marine Survival of Coho Salmon (Oncorhynchus Kisutch) from Small Coastal Watersheds in Northern California

Marine Survival of Coho Salmon (Oncorhynchus Kisutch) from Small Coastal Watersheds in Northern California
Author: Sean M. Cochran
Publisher:
Total Pages: 110
Release: 2015
Genre: Coho salmon
ISBN:

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California coho salmon Oncorhynchus kisutch populations are at low abundance and factors governing recruitment variability remain unclear. Changes in freshwater habitat that increase juvenile growth and size of salmon outmigrating to sea (smolts) may improve ocean survival. The best data to evaluate this among wild coho salmon populations in California come from life-cycle monitoring (LCM) stations. This study investigated whether marine survival is size-dependent (larger individuals within a cohort have higher marine survival) and whether sites and years with higher growth have higher marine survival across five LCM locations. I tested for size-dependent survival using two techniques: comparing the size of outmigrating smolts and back-calculated smolt sizes from scales of adult fish that survived to return; and using information from fish that were tagged as smolts and survived to return as adults. Analyses comparing smolt sizes back-calculated from adult scales and observed lengths from smolt traps indicated that within-year size-dependent mortality at sea occurred among many outmigrant cohorts, while analyses using smolt lengths of recaptured adult fish tagged as juveniles did not indicate any within-cohort size-selective mortality at sea. Potential explanations for the conflicting results include errors in scale back-calculation; smolts growing in habitats below smolt traps prior to ocean entrance; and fish with alternative juvenile life histories that were unaccounted for in outmigrant sampling surviving and contributing to the adult populations. In regressions across sites and years, marine survival was positively associated with early marine growth measured from the scales of surviving adult salmon and in some instances marine survival was also positively associated with mean fork length of outmigrating smolts. Although size may be an important determinant of ocean survival, this study shows that comparison of back-calculated smolts sizes from scales of adult fish and observed lengths of smolts at an upstream trapping location are unreliable approaches for testing size-selective mortality. This study also provides support for expanding studies at LCM stations to determine how juvenile coho salmon use habitat downstream of migrant trapping locations.


Species profiles

Species profiles
Author: Thomas J. Hassler
Publisher:
Total Pages: 34
Release: 1987
Genre:
ISBN:

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Population Dynamics of the Coho Salmon and Its Response to Logging in Three Coastal Streams

Population Dynamics of the Coho Salmon and Its Response to Logging in Three Coastal Streams
Author: David Wah Kwai Au
Publisher:
Total Pages: 490
Release: 1972
Genre: Coho salmon
ISBN:

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This study examines the ecology and dynamics of coho salmon (Oncorhynchus kisutch) in environments experimentally altered by logging. The objective was to evaluate processes that stabilize or regulate the populations. Two small watersheds in Oregon's Coast Range were logged in 1966, one clear-cut, the other patch-cut. A third adjacent watershed was left uncut as a control. The influence of these treatments on the biology of the coho was assessed. Attention was concentrated on populations of the six year classes 1963 to 1968. The natural variability of streamflow-related conditions influencing both the magnitude and pattern of coho recruitment each year was increased in the logged watersheds. Peak flow during storms increased; intragravel dissolved oxygen levels decreased in the stream draining the clear-cut watershed. These changes, however, were apparently within the range of variation that the coho naturally experience. Increased stream temperatures and mortalities, due to the logging effects, altered the post-recruitment life conditions of the coho in that stream but did not significantly affect the final smolt yield. The nocturnal behavior of recently emerged fry leads to recruitment along the stream length. Fry tend to emerge en masse from the redds at night, and large numbers proceed immediately to disperse downstream. This migration continues for several successive nights, beginning each night soon after dark. Evidence is presented indicating that fry emigration is primarily a dispersal mechanism that distributes fry from redd sites to nursery areas. It is hypothesized that the series of events leading from fry dispersal to be quiescent behavior at night, characteristic of resident fry, is a developmental sequence involving the physiology and maturity of the fry, modified by agonistic activity. Adjustments in coho population size were largely accomplished by fall, resulting in stable and characteristic population levels in each stream. A stable smolt yield was a further result. These adjustments are accomplished through high mortality during the months of the first spring and summer. This mortality is likely density dependent and related to the territorial and agonistic behavior of the fish. Growth, biomass, and net production varied greatly during each year. Seasonal changes in growth rate resulted in seasonal variations in biomass that were in contrast to the stabilized trends of population number. The pattern of net production rate was also largely determined by the seasonal growth pattern, and like biomass, did not show: a tendency to stabilize with time. It averaged 5 g/m2 among the three streams for the period June 1 to April 15. The coho populations seem naturally regulated most importantly with respect to number. The patterns of biomass and rate of net production may be understood as an interaction of seasonally variable growth rate with stabilizing population numbers. This study has shown that coho streams normally produce characteristic levels of smolt yield in spite of large natural variations in fry input and conditions for growth. The range of environmental variation for which this result holds may include short-term changes due to logging. However a normal population response to such a severe alteration as occurred on Needle Branch is very likely conditional upon a program that at least includes vigorous stream clearance, the restriction of additional mortality to early summer, when population adjustments are far from complete, and the encouragement of streamside revegetation. A streamside buffer strip of trees is an effective way of protecting aquatic resources.


Overwinter Survival and Movement of Juvenile Coho Salmon (Oncorhynchus Kisutch) in Relation to Large Woody Debris and Low-velocity Habitat in Northern California Streams

Overwinter Survival and Movement of Juvenile Coho Salmon (Oncorhynchus Kisutch) in Relation to Large Woody Debris and Low-velocity Habitat in Northern California Streams
Author: John D. Deibner-Hanson
Publisher:
Total Pages: 96
Release: 2019
Genre: Coho salmon
ISBN:

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Some studies suggest that Coho Salmon populations are limited by overwinter survival as a result of insufficient winter habitat. While many small-scale projects aim to define reach and basin-level habitat requirements for Coho Salmon, large-scale studies that assess multiple independent populations remain few. For my research, I quantified large woody debris (LWD) by volume and low-velocity rearing habitat (LVH) as percent area in three coastal watersheds of similar size in northern California to untangle the relationships between Coho Salmon overwinter survival, emigration timing and specific winter habitats. I used mark-recapture techniques with PIT tags to formulate Cormack-Jolly-Seber models for each of three years (2013-2015) to (1) estimate apparent overwinter survival of juvenile Coho Salmon populations, (2) determine to what extent outmigration timing varies among basins, and (3) evaluate the relationships between reach-specific survival, movement and winter habitat. LWD volume ranged from 47.8 to 109.9 cubic meters per kilometer among stream reaches while LVH area spanned from 9.3% to 23.6% of total stream area per reach. Effects of LWD on apparent overwinter survival and early emigration were absent during all three years of the study. Effects of LVH were not observed during 2013 and 2014. In 2015, LVH correlated positively with apparent overwinter survival and negatively with emigration. Larger Coho Salmon had higher apparent overwinter survival rates than small fish, whereas smaller fish had greater emigrations rates before spring. Mean apparent overwinter survival varied by basin from 0.052 to 0.567 but basins maintained consistency across years. Early emigration rates ranged even further by basin (0.023-0.773). Variation in both apparent overwinter survival and early emigration was much greater among basins than within basins. A lot remains to be learned regarding how habitat affects the migratory behavior of Coho Salmon in California and these results suggest the effects may vary significantly by stream. The drastic life history differences observed in neighboring Coho Salmon populations demonstrate the plasticity in a species once thought to be relatively inflexible. Moving forward, incorporating multi-basin approaches should be considered when evaluating freshwater survival and movement to inform large-scale restoration and conservation.


A Population Model for Coho Salmon (Onchorhynchus Kisutch) in Freshwater Creek

A Population Model for Coho Salmon (Onchorhynchus Kisutch) in Freshwater Creek
Author: Gabriel Scheer
Publisher:
Total Pages: 136
Release: 2017
Genre: Coho salmon
ISBN:

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Historic land use practices and associated habitat degradation have led to significant declines in coho salmon (Oncorhynchus kisutch ) populations across their range. In California they are a state and federally listed species, requiring population monitoring and management plans tailored towards recovery. Traditionally, juvenile coho salmon in California were thought to spend approximately one year in their natal freshwater habitats before migrating to sea the following spring and summer as smolts. However, recent work has documented considerable variation in juvenile life history and migration timing. Specifically, juveniles that migrate downstream prior to one year of age and spend their winter rearing in estuary habitat have been shown to produce significant adult returns. Using 14 years of life-stage-specific survival and movement data collected on Freshwater Creek in northern California, I constructed a habitat-base life cycle model to evaluate expected population response to restoration actions, and to incorporate life history diversity into population projections. This modeling effort is divided into three sections: (1) parameterize stage specific survival rates and probability of expressing an early emigrant life history; (2) conduct sensitivity analysis to quantify which life stages are most influential in determining population status; (3) use stochastic simulations to quantitatively evaluate how population dynamics and extinction risk are affected by inclusion of life history diversity and alternative restoration scenarios. The resulting analyses showed that, across locations and years, between 3-29% of juvenile coho are early migrants to the stream estuary ecotone during their first winter. The majority of early migrants originated in the main-stem reaches lower in the watershed. Subsequent sensitivity analysis identified marine survival and smolt emigrant overwinter survival as highly influential in the long-term trends for this population. While the proportion of individuals expressing an 'early emigrant' life history variant is significant, this strategy showed low sensitivity relative to other life stages in defining long-term population growth under this modeling construct. In contrast, 50-year population simulations showed significant gains in adult escapement up to 43% when early emigrant life histories were included. This suggests that while alternative life history variants may not be the single greatest driver of population growth, their exclusion in management models may constitute a significant oversight in population management. Additionally, the probability of local population extinction was reduced substantially from 36% to 8% with the incorporation of life history diversity in the modeling structure. Historic coho salmon rearing habitats have been vastly diminished during the last 100 years in both stream and estuary areas. This modeling approach can help to identify sites to focus habitat restoration where it can strengthen individual populations' long-term growth or abilities to persist in the face of environmental stochasticity.


Species Profiles

Species Profiles
Author: Thomas J. Hassler
Publisher:
Total Pages: 30
Release: 1987
Genre: Coastal ecology
ISBN:

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Species Profiles

Species Profiles
Author: Mark A. Allen
Publisher:
Total Pages: 40
Release: 1986
Genre: Chinook salmon
ISBN:

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The Influence of Habitat Characteristics on Abundance and Growth of Juvenile Coho Salmon Oncorhynchus Kisutch in Constructed Habitats in the Middle Klamath River Basin

The Influence of Habitat Characteristics on Abundance and Growth of Juvenile Coho Salmon Oncorhynchus Kisutch in Constructed Habitats in the Middle Klamath River Basin
Author: Michelle R. Krall
Publisher:
Total Pages: 80
Release: 2016
Genre: Coho salmon
ISBN:

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Substantial investment has been directed toward construction of off-channel ponds in the middle Klamath River basin to benefit Coho Salmon populations. Previous research showed that abundance, retention, and growth of juvenile Coho Salmon varied across sites but were not consistently different between constructed ponds and natural habitats; instead, variation was attributed to individual site characteristics. However, the characteristics responsible for these differences are not clear. In this exploratory study, I investigated the effect of accessibility on juvenile Coho Salmon abundance within nine constructed ponds. I also assessed whether habitat conditions, Coho Salmon density, and food availability within the ponds could predict abundance, retention, and growth of Coho Salmon. Few strong relationships were found between characteristics of ponds and the response variables. Despite potentially stressful conditions at some sites, Coho Salmon occupied most ponds through the summer, suggesting that they provide suitable rearing habitats. Lack of accessibility throughout the year had potentially important effects on the survival and life history of individuals trapped in constructed ponds. Retention rates were strongly correlated with zooplankton availability, while Coho Salmon density and available benthic prey displayed little correlation with retention. While growth rate differed among ponds; while measures of prey availability did not explain variation in growth rate, growth rate was negatively correlated with Coho Salmon density in the ponds. Constructed off-channel ponds serve as important rearing habitat for Coho Salmon and an increased understanding of their role in Coho Salmon rearing and production is necessary.