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Cellular Automata and Complex Systems: Methods for Modeling Biological Phenomena

Cellular Automata and Complex Systems: Methods for Modeling Biological Phenomena
Author: Bilotta, Eleonora
Publisher: IGI Global
Total Pages: 502
Release: 2010-06-30
Genre: Education
ISBN: 1615207880

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"The theme of this book is the use of Cellular Automatas (CAs) to model biological systems, describing 2-D CAs to create populations of "life-like agents" with their own genomes"--Provided by publisher.


Cellular Automaton Modeling of Biological Pattern Formation

Cellular Automaton Modeling of Biological Pattern Formation
Author: Andreas Deutsch
Publisher: Springer Science & Business Media
Total Pages: 331
Release: 2007-12-26
Genre: Science
ISBN: 0817644156

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This book focuses on a challenging application field of cellular automata: pattern formation in biological systems, such as the growth of microorganisms, dynamics of cellular tissue and tumors, and formation of pigment cell patterns. These phenomena, resulting from complex cellular interactions, cannot be deduced solely from experimental analysis, but can be more easily examined using mathematical models, in particular, cellular automaton models. While there are various books treating cellular automaton modeling, this interdisciplinary work is the first one covering biological applications. The book is aimed at researchers, practitioners, and students in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science interested in a cellular automaton approach to biological modeling.


Simulating Complex Systems by Cellular Automata

Simulating Complex Systems by Cellular Automata
Author: Alfons G. Hoekstra
Publisher: Springer Science & Business Media
Total Pages: 392
Release: 2010-06-13
Genre: Computers
ISBN: 3642122027

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Deeply rooted in fundamental research in Mathematics and Computer Science, Cellular Automata (CA) are recognized as an intuitive modeling paradigm for Complex Systems. Already very basic CA, with extremely simple micro dynamics such as the Game of Life, show an almost endless display of complex emergent behavior. Conversely, CA can also be designed to produce a desired emergent behavior, using either theoretical methodologies or evolutionary techniques. Meanwhile, beyond the original realm of applications - Physics, Computer Science, and Mathematics – CA have also become work horses in very different disciplines such as epidemiology, immunology, sociology, and finance. In this context of fast and impressive progress, spurred further by the enormous attraction these topics have on students, this book emerges as a welcome overview of the field for its practitioners, as well as a good starting point for detailed study on the graduate and post-graduate level. The book contains three parts, two major parts on theory and applications, and a smaller part on software. The theory part contains fundamental chapters on how to design and/or apply CA for many different areas. In the applications part a number of representative examples of really using CA in a broad range of disciplines is provided - this part will give the reader a good idea of the real strength of this kind of modeling as well as the incentive to apply CA in their own field of study. Finally, we included a smaller section on software, to highlight the important work that has been done to create high quality problem solving environments that allow to quickly and relatively easily implement a CA model and run simulations, both on the desktop and if needed, on High Performance Computing infrastructures.


New Methods and Paradigms for Modeling Dynamic Processes Based on Cellular Automata

New Methods and Paradigms for Modeling Dynamic Processes Based on Cellular Automata
Author: Bilan, Stepan Mykolayovych
Publisher: IGI Global
Total Pages: 326
Release: 2020-10-16
Genre: Computers
ISBN: 1799826511

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The accelerating development of computer technology and communications can replace many of the functions of human intellectual activity, as well as help them in making decisions in various situations of their lives. To implement intelligent functions for various purposes, numerous models, paradigms, architectures, and hardware and software are being developed. Because the world is constantly evolving, there is a need to constantly study various dynamic processes to determine possible negative situations that can lead to undesirable catastrophic phenomena and changes. Recently, more attention has been paid to the study of natural processes in nature. Scientific works are appearing that describe the behavior and development of living organisms and the processes of their interaction. Cellular automata are increasingly used to describe and model them. New Methods and Paradigms for Modeling Dynamic Processes Based on Cellular Automata is a collection of innovative research that describes the models and paradigms of building cellular automata that allows for the simulation of the dynamics of the interaction of living organisms from a different scientific point of view. For this, asynchronous cellular automata with a dynamically changing number of “living” cells are used. The chapters describe the theoretical concepts of constructing asynchronous cellular automata with active cells. Much attention is paid to the use of the proposed theoretical principles for solving modeling problems and solving specific applied problems of forming pseudorandom sequences and image processing based on modeling of the human visual channel. Featuring research on topics such as colony interaction, image processing and recognition, and influence mode, this book is ideally designed for engineers, programmers, software developers, researchers, academicians, and students.


Simulating Complex Systems by Cellular Automata

Simulating Complex Systems by Cellular Automata
Author: Alfons G. Hoekstra
Publisher: Springer
Total Pages: 392
Release: 2010-06-03
Genre: Computers
ISBN: 3642122035

Download Simulating Complex Systems by Cellular Automata Book in PDF, ePub and Kindle

Deeply rooted in fundamental research in Mathematics and Computer Science, Cellular Automata (CA) are recognized as an intuitive modeling paradigm for Complex Systems. Already very basic CA, with extremely simple micro dynamics such as the Game of Life, show an almost endless display of complex emergent behavior. Conversely, CA can also be designed to produce a desired emergent behavior, using either theoretical methodologies or evolutionary techniques. Meanwhile, beyond the original realm of applications - Physics, Computer Science, and Mathematics – CA have also become work horses in very different disciplines such as epidemiology, immunology, sociology, and finance. In this context of fast and impressive progress, spurred further by the enormous attraction these topics have on students, this book emerges as a welcome overview of the field for its practitioners, as well as a good starting point for detailed study on the graduate and post-graduate level. The book contains three parts, two major parts on theory and applications, and a smaller part on software. The theory part contains fundamental chapters on how to design and/or apply CA for many different areas. In the applications part a number of representative examples of really using CA in a broad range of disciplines is provided - this part will give the reader a good idea of the real strength of this kind of modeling as well as the incentive to apply CA in their own field of study. Finally, we included a smaller section on software, to highlight the important work that has been done to create high quality problem solving environments that allow to quickly and relatively easily implement a CA model and run simulations, both on the desktop and if needed, on High Performance Computing infrastructures.


Theory of Practical Cellular Automaton

Theory of Practical Cellular Automaton
Author: Xuewei Li
Publisher: Springer
Total Pages: 352
Release: 2018-05-17
Genre: Business & Economics
ISBN: 9811074976

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This book addresses the intellectual foundations, function, modeling approaches and complexity of cellular automata; explores cellular automata in combination with genetic algorithms, neural networks and agents; and discusses the applications of cellular automata in economics, traffic and the spread of disease. Pursuing a blended approach between knowledge and philosophy, it assigns equal value to methods and applications.


Cellular Automaton Modeling of Biological Pattern Formation

Cellular Automaton Modeling of Biological Pattern Formation
Author: Andreas Deutsch
Publisher: Birkhäuser
Total Pages: 464
Release: 2018-03-09
Genre: Mathematics
ISBN: 1489979808

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This text explores the use of cellular automata in modeling pattern formation in biological systems. It describes several mathematical modeling approaches utilizing cellular automata that can be used to study the dynamics of interacting cell systems both in simulation and in practice. New in this edition are chapters covering cell migration, tissue development, and cancer dynamics, as well as updated references and new research topic suggestions that reflect the rapid development of the field. The book begins with an introduction to pattern-forming principles in biology and the various mathematical modeling techniques that can be used to analyze them. Cellular automaton models are then discussed in detail for different types of cellular processes and interactions, including random movement, cell migration, adhesive cell interaction, alignment and cellular swarming, growth processes, pigment cell pattern formation, tissue development, tumor growth and invasion, and Turing-type patterns and excitable media. In the final chapter, the authors critically discuss possibilities and limitations of the cellular automaton approach in modeling various biological applications, along with future research directions. Suggestions for research projects are provided throughout the book to encourage additional engagement with the material, and an accompanying simulator is available for readers to perform their own simulations on several of the models covered in the text. QR codes are included within the text for easy access to the simulator. With its accessible presentation and interdisciplinary approach, Cellular Automaton Modeling of Biological Pattern Formation is suitable for graduate and advanced undergraduate students in mathematical biology, biological modeling, and biological computing. It will also be a valuable resource for researchers and practitioners in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science. PRAISE FOR THE FIRST EDITION “An ideal guide for someone with a mathematical or physical background to start exploring biological modelling. Importantly, it will also serve as an excellent guide for experienced modellers to innovate and improve their methodologies for analysing simulation results.” —Mathematical Reviews


Modeling Chemical Systems using Cellular Automata

Modeling Chemical Systems using Cellular Automata
Author: Lemont B. Kier
Publisher: Springer Science & Business Media
Total Pages: 177
Release: 2006-02-23
Genre: Science
ISBN: 1402036906

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Modeling Chemical Systems using Cellular Automata provides a practical introduction to an exciting modeling paradigm for complex systems. The book first discusses the nature of scientific inquiry using models and simulations, and then describes the nature of cellular automata models. It then gives detailed descriptions, with examples and exercises, of how cellular automata models can be used in the study of a wide variety chemical, physical, and biochemical phenomena. Topics covered include models of water itself, solution phenomena, solution interactions with stationary systems, first- and second-order kinetic phenomena, enzyme kinetics, vapor-liquid equilibrium, and atomic and molecular excited-state kinetics. The student experiences these systems through hands-on examples and guided studies. This book is the first of its kind: a textbook and a laboratory manual about cellular automata modeling of common systems in chemistry. The book is designed to be used as a text in undergraduate courses dealing with complex systems and/or as a computational supplement to laboratory courses taught at the undergraduate level. The book includes: - Compact descriptions of a large variety of physical and chemical phenomena - Illustrative examples of simulations, with exercises for further study - An instructor's manual for use of the program The book will be of great value in undergraduate courses in chemistry, physics, biology, applied mathematics, and bioinformatics, and as a supplement for laboratory courses in introductory chemistry, organic chemistry, physical chemistry, medicinal chemistry, chemical engineering and other courses dealing with statistical and dynamic systems. It allows the exploration of a wide range of dynamic phenomena, many of which are not normally accessible within conventional laboratory settings due to limitations of time, cost, and experimental equipment. The book is both a textbook on applied Cellular Automata and a lab manual for chemistry (physics, engineering) courses with lab activity. It would supplement other lab work and be an additonal book the students would use in the course. The authors have assessed the emerging need for this kind of activity in science labs because of the cost of the practical activitites and the frequent failure of some exercises leading to lost didactic value of some experiments. This book is pioneering an alternative that will grow in use. There are no course directors who would use Cellular Automata exclusively. The authors see an emerging interest in this kind of work in courses that contain lab exercises. One such course is the graduate course that Lemont Kier gives in Life Sciences about complexity. He uses many examples and studies from Cellular Automata in the latter part of this course.


Nonlinear Phenomena in Complex Systems

Nonlinear Phenomena in Complex Systems
Author: A.N. Proto
Publisher: Elsevier
Total Pages: 264
Release: 2012-12-02
Genre: Science
ISBN: 0444598758

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This book contains a thorough treatment of neural networks, cellular-automata and synergetics, in an attempt to provide three different approaches to nonlinear phenomena in complex systems. These topics are of major interest to physicists active in the fields of statistical mechanics and dynamical systems. They have been developed with a high degree of sophistication and include the refinements necessary to work with the complexity of real systems as well as the more recent research developments in these areas.


The Computer Music Tutorial, second edition

The Computer Music Tutorial, second edition
Author: Curtis Roads
Publisher: MIT Press
Total Pages: 1287
Release: 2023-06-06
Genre: Computers
ISBN: 026236154X

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Expanded, updated, and fully revised—the definitive introduction to electronic music is ready for new generations of students. Essential and state-of-the-art, The Computer Music Tutorial, second edition is a singular text that introduces computer and electronic music, explains its motivations, and puts topics into context. Curtis Roads’s step-by-step presentation orients musicians, engineers, scientists, and anyone else new to computer and electronic music. The new edition continues to be the definitive tutorial on all aspects of computer music, including digital audio, signal processing, musical input devices, performance software, editing systems, algorithmic composition, MIDI, and psychoacoustics, but the second edition also reflects the enormous growth of the field since the book’s original publication in 1996. New chapters cover up-to-date topics like virtual analog, pulsar synthesis, concatenative synthesis, spectrum analysis by atomic decomposition, Open Sound Control, spectrum editors, and instrument and patch editors. Exhaustively referenced and cross-referenced, the second edition adds hundreds of new figures and references to the original charts, diagrams, screen images, and photographs in order to explain basic concepts and terms. Features New chapters: virtual analog, pulsar synthesis, concatenative synthesis, spectrum analysis by atomic decomposition, Open Sound Control, spectrum editors, instrument and patch editors, and an appendix on machine learning Two thousand references support the book’s descriptions and point readers to further study Mathematical notation and program code examples used only when necessary Twenty-five years of classroom, seminar, and workshop use inform the pace and level of the material