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Building Ontologies with Basic Formal Ontology

Building Ontologies with Basic Formal Ontology
Author: Robert Arp
Publisher: MIT Press
Total Pages: 245
Release: 2015-08-28
Genre: Science
ISBN: 026232959X

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An introduction to the field of applied ontology with examples derived particularly from biomedicine, covering theoretical components, design practices, and practical applications. In the era of “big data,” science is increasingly information driven, and the potential for computers to store, manage, and integrate massive amounts of data has given rise to such new disciplinary fields as biomedical informatics. Applied ontology offers a strategy for the organization of scientific information in computer-tractable form, drawing on concepts not only from computer and information science but also from linguistics, logic, and philosophy. This book provides an introduction to the field of applied ontology that is of particular relevance to biomedicine, covering theoretical components of ontologies, best practices for ontology design, and examples of biomedical ontologies in use. After defining an ontology as a representation of the types of entities in a given domain, the book distinguishes between different kinds of ontologies and taxonomies, and shows how applied ontology draws on more traditional ideas from metaphysics. It presents the core features of the Basic Formal Ontology (BFO), now used by over one hundred ontology projects around the world, and offers examples of domain ontologies that utilize BFO. The book also describes Web Ontology Language (OWL), a common framework for Semantic Web technologies. Throughout, the book provides concrete recommendations for the design and construction of domain ontologies.


Building Ontologies with Basic Formal Ontology

Building Ontologies with Basic Formal Ontology
Author: Robert Arp
Publisher: MIT Press
Total Pages: 245
Release: 2015-07-31
Genre: Science
ISBN: 0262527812

Download Building Ontologies with Basic Formal Ontology Book in PDF, ePub and Kindle

An introduction to the field of applied ontology with examples derived particularly from biomedicine, covering theoretical components, design practices, and practical applications. In the era of “big data,” science is increasingly information driven, and the potential for computers to store, manage, and integrate massive amounts of data has given rise to such new disciplinary fields as biomedical informatics. Applied ontology offers a strategy for the organization of scientific information in computer-tractable form, drawing on concepts not only from computer and information science but also from linguistics, logic, and philosophy. This book provides an introduction to the field of applied ontology that is of particular relevance to biomedicine, covering theoretical components of ontologies, best practices for ontology design, and examples of biomedical ontologies in use. After defining an ontology as a representation of the types of entities in a given domain, the book distinguishes between different kinds of ontologies and taxonomies, and shows how applied ontology draws on more traditional ideas from metaphysics. It presents the core features of the Basic Formal Ontology (BFO), now used by over one hundred ontology projects around the world, and offers examples of domain ontologies that utilize BFO. The book also describes Web Ontology Language (OWL), a common framework for Semantic Web technologies. Throughout, the book provides concrete recommendations for the design and construction of domain ontologies.


Formal Ontology in Information Systems

Formal Ontology in Information Systems
Author: S. Borgo
Publisher: IOS Press
Total Pages: 278
Release: 2018-09-28
Genre: Computers
ISBN: 1614999104

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FOIS is the flagship conference of the International Association for Ontology and its Applications (IAOA). Its interdisciplinary research focus lies at the intersection of philosophical ontology, linguistics, logic, cognitive science, and computer science, as well as in the applications of ontological analysis to conceptual modeling, knowledge engineering, knowledge management, information-systems development, library and information science, scientific research, and semantic technologies in general. This volume presents the proceedings of FOIS 2018, held in Cape Town, South Africa, from 19-21 September. It was the 10th edition and 20th anniversary of the conference series. The volume contains 19 papers grouped into 4 sections: Foundations (7 papers), Agents and Properties (4 papers), Methods and Tools (4 papers), and Applications (4 papers). Regarding the applications of ontologies, a broad spectrum of areas is covered, including in particular biology and medicine, IoT, engineering and linguistics. Formal Ontology in Information Systems - Proceedings of the 10th International Conference (FOIS 2018) will be of interest to researchers from all disciplines with an interest in formal ontology.


Applied Ontology

Applied Ontology
Author: Katherine Munn
Publisher: Walter de Gruyter
Total Pages: 342
Release: 2013-05-02
Genre: Philosophy
ISBN: 3110324865

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Ontology is the philosophical discipline which aims to understand how things in the world are divided into categories and how these categories are related together. This is exactly what information scientists aim for in creating structured, automated representations, called ‘ontologies,’ for managing information in fields such as science, government, industry, and healthcare. Currently, these systems are designed in a variety of different ways, so they cannot share data with one another. They are often idiosyncratically structured, accessible only to those who created them, and unable to serve as inputs for automated reasoning. This volume shows, in a non-technical way and using examples from medicine and biology, how the rigorous application of theories and insights from philosophical ontology can improve the ontologies upon which information management depends.


Ontology: Laying the Foundations

Ontology: Laying the Foundations
Author: Nicolai Hartmann
Publisher: Walter de Gruyter GmbH & Co KG
Total Pages: 375
Release: 2019-10-21
Genre: Philosophy
ISBN: 3110627353

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It is no exaggeration to say that of the early 20th century German philosophers who claimed to establish a new ontology, former neo-Kantian turned realist Nicolai Hartmann is the only one to have actually followed through. "Ontology: Laying the Foundations" deals with "what is insofar as it is," and its four parts tackle traditional ontological assumptions and prejudices and traditional categories such as substance, thing, individual, whole, object, and phenomenon; a novel redefinition of existence and essence in terms of the ontological factors Dasein and Sosein and their interrelations; an analysis of modes of "givenness" and the ontological embeddedness of cognition in affective transcendent acts; and a discussion of the status of ideal being, including mathematical being, phenomenological essences, logical laws, values, and the interconnections between the ideal and real spheres. Hartmann’s work offers rich resources for those interested in overcoming the human-centeredness of much 20th century philosophy. Hartmann’s work offers rich resources for those interested in overcoming the human-centeredness of much 20th century philosophy.


Heidegger's Ontology of Events

Heidegger's Ontology of Events
Author: Bahoh James Bahoh
Publisher: Edinburgh University Press
Total Pages: 348
Release: 2019-11-01
Genre: Philosophy
ISBN: 1474443710

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James Bahoh proposes a new methodology for explaining Heidegger's philosophy: diagenic analysis. This approach solves a set of interpretive problems that have stymied previous approaches to his difficult later work and led to substantial inconsistencies in the available scholarship. Using it, Bahoh reconstructs Heidegger's concept of event in relation to his theories of history, truth, difference, ground and time-space. In these contexts, Bahoh argues that Heidegger's logic of events entails a logic of difference that is prior to and constitutive for the logic of identity essential to traditional metaphysics. The logic of events explains the generation of ontological structures grounding individuated finite domains - that is, it explains the generation of the logic of worlds of beings.


New Foundations of Ontology

New Foundations of Ontology
Author: Gustav Bergmann
Publisher: Univ of Wisconsin Press
Total Pages: 404
Release: 1992
Genre: Philosophy
ISBN: 9780299131302

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This posthumous work by Gustav Bergmann was essentially complete before his death in 1987. In it, he proposes a systematic ontological system that would account for all the basic areas of human thought and experience within an extended framework of logical atomism. Bergmann's approach to traditional problems of ontology seeks to balance the competing demands of phenomenology, which emphasizes the reality presented to us by experience, and of metaphysics, which delineates the most general kinds of existents given in experience and the most general kinds of relationships they bear to one another. Beginning with atomic facts composed of phenomenally presented qualities, Bergmann goes on to develop an ontology that can account for the ordinary objects of everyday experience, the mental states through which we become aware of and acquire knowledge of these objects, and even the truths of logic and mathematics that allow us to extend our thought and discourse about ordinary objects beyond what may be phenomenally apparent. Many ontologists will be particularly interested in the attention Bergmann pays to the concept of logical form. In his earlier works, Bergmann claimed that "the form of the world is in the world"; the "fact" that a thing or a complex has a certain logical or syntactic form, he argued, is itself one more fact of our experienced reality, rather than a contribution of the mind or of linguistic conventions. Critics of this claim have suggested that paradoxes and contradictions result from it. In New Foundations of Ontology Bergmann responds, arguing that his concept of logical form does not necessarily create the problems noted in earlier critiques.


Narrative Ontology

Narrative Ontology
Author: Axel Hutter
Publisher: John Wiley & Sons
Total Pages: 255
Release: 2021-11-18
Genre: Philosophy
ISBN: 1509543937

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This book is a critical inquiry into three ideas that have been at the heart of philosophical reflection since time immemorial: freedom, God and immortality. Their inherent connection has disappeared from our thought. We barely pay attention to the latter two ideas, and the notion of freedom is used so loosely today that it has become vacuous. Axel Hutter’s book seeks to remind philosophy of its distinct task: only in understanding itself as human self-knowledge that articulates itself in these three ideas will philosophy do justice to its own concept. In developing this line of argument, Hutter finds an ally in Thomas Mann, whose novel Joseph and His Brothers has more to say about freedom, God and immortality than most contemporary philosophy does. Through his reading of Mann’s novel, Hutter explores these three ideas in a distinctive way. He brings out the intimate connection between philosophical self-knowledge and narrative form: Mann’s novel gives expression to the depth of human self-understanding and, thus, demands a genuinely philosophical interpretation. In turn, philosophical concepts are freed from abstractness by resonating with the novel’s motifs and its rich language. Narrative Ontology is both a highly original work of philosophy and a vigorous defence of humanism. It brings together philosophy and literature in a creative way, it will be of great interest to students and scholars in philosophy, literature and the humanities in general.


The Red and the Real

The Red and the Real
Author: Jonathan Cohen
Publisher: Oxford University Press on Demand
Total Pages: 281
Release: 2009-06-25
Genre: Philosophy
ISBN: 0199556164

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The Red and the Real offers a new approach to longstanding philosophical puzzles about what colors are and how they fit into the natural world. Jonathan Cohen argues for a role-functionalist treatment of color - a view according to which colors are identical to certain functional roles involving perceptual effects on subjects. Cohen first argues (on broadly empirical grounds) for the more general relationalist view that colors are constituted in terms of relations betweenobjects, perceivers, and viewing conditions. He responds to semantic, ontological, and phenomenological objections against this thesis, and argues that relationalism offers the best hope of respecting both empirical results and ordinary belief about color. He then defends the more specific rolefunctionalist-account by contending that the latter is the most plausible form of color relationalism.


An Introduction to Ontology

An Introduction to Ontology
Author: Nikk Effingham
Publisher: John Wiley & Sons
Total Pages: 230
Release: 2013-08-26
Genre: Philosophy
ISBN: 0745665470

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In this engaging and wide-ranging new book, Nikk Effingham provides an introduction to contemporary ontology - the study of what exists - and its importance for philosophy today. He covers the key topics in the field, from the ontology of holes, numbers and possible worlds, to space, time and the ontology of material objects - for instance, whether there are composite objects such as tables, chairs or even you and me. While starting from the basics, every chapter is up-to-date with the most recent developments in the field, introducing both longstanding theories and cutting-edge advances. As well as discussing the latest issues in ontology, Effingham also helpfully deals in-depth with different methodological principles (including theory choice, Quinean ontological commitment and Meinongianism) and introduces them alongside an example ontological theory that puts them into practice. This accessible and comprehensive introduction will be essential reading for upper-level undergraduate and post-graduate students, as well as any reader interested in the present state of the subject.