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Inspirations from Nature

Inspirations from Nature
Author: Iman Mohammad Khalil
Publisher:
Total Pages: 434
Release: 2015
Genre: Marine natural products
ISBN:

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Marine natural products are becoming widely recognised as novel sources of drug leads. Their structural complexity has attracted synthetic chemists to explore new synthetic strategies and reagents. More recently, biosynthetic considerations of natural product has led to the proposal of biogenetic precursors that may lead to a biomimetic synthesis of a particular family of compounds. If successful, biomimetic syntheses may lead to the synthesis of multiple compounds in a family of natural products from simple precursors in a short, stepwise fashion. Thiaplidiaquinone A (2.1) and B (2.2) were synthesised in a 5-step biomimetic reaction sequence where the dimeric core was constructed by allowing a simple benzoquinone to dimerise and cyclise in the presence of base. The installation of the dioxothiazine ring system allowed for the synthesis of the two natural products alongside their corresponding dioxothiazine regioisomers 2.58 and 2.59. Cytotoxicity bioassays revealed that the position of the geranyl sidechains determined the mode of cell death (necrosis versus apoptosis) whereas the dioxothiazine ring regulated the potency of the compounds. The synthesised regioisomers were found to be more potent than their natural product counterparts with one, 2.58, exhibiting sub-panel selectivity towards melanoma cancer cell lines and was selected for acute toxicity testing by the NCI. A biomimetic synthesis of pyridoacridine alkaloids amphimedine (3.3), deoxyamphimedine (3.16) and demethyldeoxyamphimedine (3.11) from the structurally simpler styelsamine D (3.13) was developed. Addition of formaldehyde to the proposed biosynthetic precursor, styelsamine D, gave the two natural products 3.11 and 3.16 in a one pot synthesis where subsequent oxidation of 3.16 gave amphimedine. It was found that pre-functionalisation of the dopamine precursor to styelsamine D allowed for the synthesis of N-ethyl analogues of amphimedine and deoxyamphimedine as well as an N-benzyl analogue of deoxyamphimedine. Biomimetic considerations of the neoamphimedine, arnoamine and alpkinidine scaffold were also investigated and the results highlighted herein. Biological evaluation of the amphimedine, deoxyamphimedine and demethyldeoxyamphimedine at the NCI identified deoxyamphimedine as a strong cytotoxic agent, exhibiting sub-panel selectivity towards central nervous system cancer cell lines.


Biomimetic Assembly of Reactive Units for the Total Synthesis of Marine Natural Products from Dual Biosynthetic Origin

Biomimetic Assembly of Reactive Units for the Total Synthesis of Marine Natural Products from Dual Biosynthetic Origin
Author: Xinming Zhang
Publisher:
Total Pages: 0
Release: 2019
Genre:
ISBN:

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The work described in this PhD dissertation is dedicated to the total synthesis of intriguing natural product structures. Two distinct families of natural substances of marine origin have been targeted in this work: the halichonadins and the araiosamines.- With the halichonadins, we plunge into the marine terpene chemistry. Isolated from sponges of the genus Halichondria, two structures have particularly drawn our attention: halichonadins K and L. Indeed, besides two subunits of terpene origin (namely halichonadin C, a natural isonitrile) with an eudesmane skeleton, a central core of peptidic origin is also original (especially a carboxylic acid disubstituted piperidine ring). A part of the work is dedicated to understanding how, in nature, isonitrile natural products may be formed and may react. The experimental part is organized according to the two following topics:1- Devise an efficient and straightforward total synthesis of halichonadin C. A strategy starting from santonin has been studied and developed. The presence of an isopropyl pending group has attracted many synthetic problems. Anyhow, an advanced intermediate comprising the whole skeleton and the crucial nitrogen atom of the target has been reached and provides good hopes for the access to halichonadin C.2- Conceiving a strategy of the stereocontroled access to the central piperidine ring of halichonadins K and L. Several strategies have been evaluated including the recourse to double Michael additions and reactions inspired by Robinson's tropinone synthesis. The peptidic central core is now accessible in a limited number of steps.Most of the pieces of the puzzle are in our hands at the end of this PhD to secure a rapid access to the complex targets that constitutes halichonadins K and L.- The chapter dedicated to araiosamines (A-D, isolated from sponges of the genus Clathria) is exploratory and allows to propose promising strategies for a bio-inspired synthesis that constitutes true challenges for the organic chemists. One of the challenges to take up is to prepare highly reactive indole aldehyde units that could be foreseen as chemical equivalents of postulated biosynthetic intermediates. A method to generate in situ such units is studied. The first applications have been directed to the synthesis of “Discodermia pyridiniums” and appear to be promising towards the total synthesis of these molecules.The work conducted during this PhD take place in the framework of the “art of total synthesis”. But, in our strategies, the chemical understanding of biosynthetic pathways is never far away.


Synthetic and Biosynthetic Approaches to Marine Natural Products

Synthetic and Biosynthetic Approaches to Marine Natural Products
Author: Asunción Barbero
Publisher: MDPI
Total Pages: 182
Release: 2020-03-24
Genre: Medical
ISBN: 3039284665

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Marine natural products containing a heterocyclic moiety in their structure are present in a wide variety of sponges, corals, algae, and fungi. Many of them show important biological activities such as cytotoxic properties against several cancer cell lines. Their challenging chemical structures have attracted the attention of many researchers who have developed various synthetic approaches. This Special Issue presents some examples of new synthetic or biosynthetic methodologies to access this type of marine natural drug.


Marine Natural Products V2

Marine Natural Products V2
Author: Poul Schever
Publisher: Elsevier
Total Pages: 407
Release: 2012-12-02
Genre: Science
ISBN: 0323151868

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Marine Natural Products: Chemical and Biological Perspectives, Volume II, reviews the state of knowledge in the chemistry and biology of marine natural products. It attempts to bring together timely and critical reviews that are representative of major current researches and that, hopefully, will also foreshadow future trends. The first three chapters of this volume deal with marine carotenoids, steroids, and diterpenoids. This is followed by a chapter that examines a single phylum, the Coelenterata, and its metabolites. The Coelenterata is an almost exclusively marine phylum of some 9000 described living species. Research predicts that the coelenterates will yield a rich harvest of organic metabolites. The final chapter, which focuses on 13C NMR spectroscopy for structural elucidation, reveals the power of this instrumental method especially when applied to the difficult problems of polyhalogenated marine metabolites.


Bioactive Marine Natural Products

Bioactive Marine Natural Products
Author: Dewan S. Bhakuni
Publisher: Springer Science & Business Media
Total Pages: 397
Release: 2006-06-30
Genre: Science
ISBN: 1402034849

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Bioactive Marine Natural Products is the first book available that covers all aspects of bioactive marine natural products. It fills the void in the literature for bioactive marine natural products. The book covers various aspects of marine natural products and it is hoped that all the major classes of bioactive compounds are included. Different classes of marine organisms and the separation and isolation techniques are discussed. The chemistry and biology of marine toxins, peptides, alkaloids, nucleosides and prostanoids are discussed in detail. Biological, toxicological and clinical evaluations are also dealt with to ensure that the book may be adopted at any stage by any practicing organic chemist or biologist, working in academia or in R and D divisions of pharmaceutical companies. Each chapter in the book includes an abstract to highlight the major points discussed in the text and concluding remarks are given. References to books, monographs, review articles and original papers are provided at the end of each chapter.


Biomimetic Approaches for Biomaterials Development

Biomimetic Approaches for Biomaterials Development
Author: Joao F. Mano
Publisher: John Wiley & Sons
Total Pages: 872
Release: 2013-02-08
Genre: Science
ISBN: 3527652299

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Biomimetics, in general terms, aims at understanding biological principles and applying them for the development of man-made tools and technologies. This approach is particularly important for the purposeful design of passive as well as functional biomaterials that mimic physicochemical, mechanical and biological properties of natural materials, making them suitable, for example, for biomedical devices or as scaffolds for tissue regeneration. The book comprehensively covers biomimetic approaches to the development of biomaterials, including: an overview of naturally occurring or nature inspired biomaterials; an in-depth treatment of the surface aspects pivotal for the functionality; synthesis and self-assembly methods to prepare devices to be used in mineralized tissues such as bone and teeth; and preparation of biomaterials for the controlled/ sustained release of bioactive agents. The last part reviews the applications of bioinspired materials and principles of design in regenerative medicine such as in-situ grown bone or cartilage as well as the biomimetic techniques for soft tissue engineering. The comprehensive scope of this book makes it a must-have addition to the bookshelf of everyone in the fields of Materials Science/Engineering, Nanotechnologies / Nanosciences, Medical Sciences, Biochemistry, Polymer Chemistry, and Biomedical Engineering.


Progress in Phytochemistry

Progress in Phytochemistry
Author: L. Reinhold
Publisher: Elsevier
Total Pages: 365
Release: 2016-07-01
Genre: Science
ISBN: 1483159809

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Progress in Phytochemistry, Volume 7, provides an overview of the state of knowledge in phytochemical research. This book is dedicated to Dr. E. C. Bate-Smith, CBE, one of the leading pioneers of the subject. Many of the topics in this volume represent aspects of phytochemical research which he has encouraged in others or to which he has himself contributed. The book begins with a chapter on chemotaxonomy. It considers in critical detail the contribution of isozyme electrophoresis to the understanding of plant variation at the population level. This is followed by separate chapters on carbonic anhydrase; biochemical developments in seed germination; the role of plant hormones in the control of the germination process; non-protein amino acids of plants; and the production of phenolics in plants in response to microbial disease. Subsequent chapters cover the terpenoid variation encountered within a single genus of marine algae, among species of Laurencia; and plants with hallucinogenic activity.