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Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences

Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences
Author: Edward E. Gbur
Publisher: John Wiley & Sons
Total Pages: 304
Release: 2020-01-22
Genre: Technology & Engineering
ISBN: 0891181822

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Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences provides readers with an understanding and appreciation for the design and analysis of mixed models for non-normally distributed data. It is the only publication of its kind directed specifically toward the agricultural and natural resources sciences audience. Readers will especially benefit from the numerous worked examples based on actual experimental data and the discussion of pitfalls associated with incorrect analyses.


Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences

Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences
Author: Edward E. Gbur
Publisher:
Total Pages: 283
Release: 2012
Genre: Mathematics
ISBN: 9780891181835

Download Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences Book in PDF, ePub and Kindle

Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences provides readers with an understanding and appreciation for the design and analysis of mixed models for non-normally distributed data. It is the only publication of its kind directed specifically toward the agricultural and natural resources sciences audience. Readers will especially benefit from the numerous worked examples based on actual experimental data and the discussion of pitfalls associated with incorrect analyses.


Generalized Linear Mixed Models with Applications in Agriculture and Biology

Generalized Linear Mixed Models with Applications in Agriculture and Biology
Author: Josafhat Salinas Ruíz
Publisher: Springer Nature
Total Pages: 436
Release: 2023-08-16
Genre: Science
ISBN: 3031328000

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This open access book offers an introduction to mixed generalized linear models with applications to the biological sciences, basically approached from an applications perspective, without neglecting the rigor of the theory. For this reason, the theory that supports each of the studied methods is addressed and later - through examples - its application is illustrated. In addition, some of the assumptions and shortcomings of linear statistical models in general are also discussed. An alternative to analyse non-normal distributed response variables is the use of generalized linear models (GLM) to describe the response data with an exponential family distribution that perfectly fits the real response. Extending this idea to models with random effects allows the use of Generalized Linear Mixed Models (GLMMs). The use of these complex models was not computationally feasible until the recent past, when computational advances and improvements to statistical analysis programs allowed users to easily, quickly, and accurately apply GLMM to data sets. GLMMs have attracted considerable attention in recent years. The word "Generalized" refers to non-normal distributions for the response variable and the word "Mixed" refers to random effects, in addition to the fixed effects typical of analysis of variance (or regression). With the development of modern statistical packages such as Statistical Analysis System (SAS), R, ASReml, among others, a wide variety of statistical analyzes are available to a wider audience. However, to be able to handle and master more sophisticated models requires proper training and great responsibility on the part of the practitioner to understand how these advanced tools work. GMLM is an analysis methodology used in agriculture and biology that can accommodate complex correlation structures and types of response variables.


JMP for Mixed Models

JMP for Mixed Models
Author: Ruth Hummel
Publisher: SAS Institute
Total Pages: 380
Release: 2021-06-09
Genre: Computers
ISBN: 1952363853

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Discover the power of mixed models with JMP and JMP Pro. Mixed models are now the mainstream method of choice for analyzing experimental data. Why? They are arguably the most straightforward and powerful way to handle correlated observations in designed experiments. Reaching well beyond standard linear models, mixed models enable you to make accurate and precise inferences about your experiments and to gain deeper understanding of sources of signal and noise in the system under study. Well-formed fixed and random effects generalize well and help you make the best data-driven decisions. JMP for Mixed Models brings together two of the strongest traditions in SAS software: mixed models and JMP. JMP’s groundbreaking philosophy of tight integration of statistics with dynamic graphics is an ideal milieu within which to learn and apply mixed models, also known as hierarchical linear or multilevel models. If you are a scientist or engineer, the methods described herein can revolutionize how you analyze experimental data without the need to write code. Inside you’ll find a rich collection of examples and a step-by-step approach to mixed model mastery. Topics include: Learning how to appropriately recognize, set up, and interpret fixed and random effects Extending analysis of variance (ANOVA) and linear regression to numerous mixed model designs Understanding how degrees of freedom work using Skeleton ANOVA Analyzing randomized block, split-plot, longitudinal, and repeated measures designs Introducing more advanced methods such as spatial covariance and generalized linear mixed models Simulating mixed models to assess power and other important sampling characteristics Providing a solid framework for understanding statistical modeling in general Improving perspective on modern dilemmas around Bayesian methods, p-values, and causal inference


Applied Statistics in Agricultural, Biological, and Environmental Sciences

Applied Statistics in Agricultural, Biological, and Environmental Sciences
Author: Barry Glaz
Publisher: John Wiley & Sons
Total Pages: 672
Release: 2020-01-22
Genre: Technology & Engineering
ISBN: 0891183590

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Better experimental design and statistical analysis make for more robust science. A thorough understanding of modern statistical methods can mean the difference between discovering and missing crucial results and conclusions in your research, and can shape the course of your entire research career. With Applied Statistics, Barry Glaz and Kathleen M. Yeater have worked with a team of expert authors to create a comprehensive text for graduate students and practicing scientists in the agricultural, biological, and environmental sciences. The contributors cover fundamental concepts and methodologies of experimental design and analysis, and also delve into advanced statistical topics, all explored by analyzing real agronomic data with practical and creative approaches using available software tools. IN PRESS! This book is being published according to the “Just Published” model, with more chapters to be published online as they are completed.


Systems Modeling

Systems Modeling
Author: Mukhtar Ahmed
Publisher: Springer Nature
Total Pages: 432
Release: 2020-07-13
Genre: Technology & Engineering
ISBN: 9811547289

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Achieving food security and economic developmental objectives in the face of climate change and rapid population growth requires systems modelling approaches, for example in the design of sustainable agriculture farming systems. Such approaches increase our understanding of system responses to different soil and climatic conditions, and provide insights into the effects of various variable climate change scenarios, providing valuable information for decision-makers. Further, in the agricultural sector, systems modelling can help optimise crop management and adaptation measures to boost productivity under variable climatic conditions. Presenting key outcomes from crop models used in agricultural systems this book is a valuable resource for professionals interested in using modelling approaches to manage the growth and improve the quality of various crops.


Linear and Generalized Linear Mixed Models and Their Applications

Linear and Generalized Linear Mixed Models and Their Applications
Author: Jiming Jiang
Publisher: Springer Science & Business Media
Total Pages: 269
Release: 2007-05-30
Genre: Mathematics
ISBN: 0387479465

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This book covers two major classes of mixed effects models, linear mixed models and generalized linear mixed models. It presents an up-to-date account of theory and methods in analysis of these models as well as their applications in various fields. The book offers a systematic approach to inference about non-Gaussian linear mixed models. Furthermore, it includes recently developed methods, such as mixed model diagnostics, mixed model selection, and jackknife method in the context of mixed models. The book is aimed at students, researchers and other practitioners who are interested in using mixed models for statistical data analysis.


Detection, characterization, and management of plant pathogens

Detection, characterization, and management of plant pathogens
Author: Islam Hamim
Publisher: Frontiers Media SA
Total Pages: 404
Release: 2024-02-20
Genre: Science
ISBN: 2832545092

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Plant pathogens cause significant economic losses and endanger agricultural sustainability. The emergence of new plant diseases is caused primarily by international trade, climate change, and pathogens' ability to evolve quickly. Rapid and accurate identification of plant pathogens is critical for disease management. The diversity and distribution of plant pathogens, on the other hand, can significantly impede disease management and diagnostic efforts. Plant pathogens employ a number of strategies that result in diversity, transmission, and host adaptation. Plant pathogens have been observed interacting with a wide range of host species such as plants, endophytes, insects, pollinators, and other plant pathogens. However, the transmission and evolution of plant pathogens in hosts, as well as the impact of pathogens on different hosts, are often unknown.


Generalized Linear Mixed Models

Generalized Linear Mixed Models
Author: Walter W. Stroup
Publisher: CRC Press
Total Pages: 547
Release: 2016-04-19
Genre: Mathematics
ISBN: 1439815135

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With numerous examples using SAS PROC GLIMMIX, this text presents an introduction to linear modeling using the generalized linear mixed model as an overarching conceptual framework. For readers new to linear models, the book helps them see the big picture. It shows how linear models fit with the rest of the core statistics curriculum and points out the major issues that statistical modelers must consider.


Generalized Linear Mixed Models

Generalized Linear Mixed Models
Author: Walter W. Stroup
Publisher: CRC Press
Total Pages: 671
Release: 2024-05-21
Genre: Mathematics
ISBN: 1498755585

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Generalized Linear Mixed Models: Modern Concepts, Methods, and Applications (2nd edition) presents an updated introduction to linear modeling using the generalized linear mixed model (GLMM) as the overarching conceptual framework. For students new to statistical modeling, this book helps them see the big picture – linear modeling as broadly understood and its intimate connection with statistical design and mathematical statistics. For readers experienced in statistical practice, but new to GLMMs, the book provides a comprehensive introduction to GLMM methodology and its underlying theory. Unlike textbooks that focus on classical linear models or generalized linear models or mixed models, this book covers all of the above as members of a unified GLMM family of linear models. In addition to essential theory and methodology, this book features a rich collection of examples using SAS® software to illustrate GLMM practice. This second edition is updated to reflect lessons learned and experience gained regarding best practices and modeling choices faced by GLMM practitioners. New to this edition are two chapters focusing on Bayesian methods for GLMMs. Key Features: • Most statistical modeling books cover classical linear models or advanced generalized and mixed models; this book covers all members of the GLMM family – classical and advanced models. • Incorporates lessons learned from experience and on-going research to provide up-to-date examples of best practices. • Illustrates connections between statistical design and modeling: guidelines for translating study design into appropriate model and in-depth illustrations of how to implement these guidelines; use of GLMM methods to improve planning and design. • Discusses the difference between marginal and conditional models, differences in the inference space they are intended to address and when each type of model is appropriate. • In addition to likelihood-based frequentist estimation and inference, provides a brief introduction to Bayesian methods for GLMMs. Walt Stroup is an Emeritus Professor of Statistics. He served on the University of Nebraska statistics faculty for over 40 years, specializing in statistical modeling and statistical design. He is a Fellow of the American Statistical Association, winner of the University of Nebraska Outstanding Teaching and Innovative Curriculum Award and author or co-author of three books on mixed models and their extensions. Marina Ptukhina (Pa-too-he-nuh), PhD, is an Associate Professor of Statistics at Whitman College. She is interested in statistical modeling, design and analysis of research studies and their applications. Her research includes applications of statistics to economics, biostatistics and statistical education. Ptukhina earned a PhD in Statistics from the University of Nebraska-Lincoln, a Master of Science degree in Mathematics from Texas Tech University and a Specialist degree in Management from The National Technical University "Kharkiv Polytechnic Institute." Julie Garai, PhD, is a Data Scientist at Loop. She earned her PhD in Statistics from the University of Nebraska-Lincoln and a bachelor’s degree in Mathematics and Spanish from Doane College. Dr Garai actively collaborates with statisticians, psychologists, ecologists, forest scientists, software engineers, and business leaders in academia and industry. In her spare time, she enjoys leisurely walks with her dogs, dance parties with her children, and playing the trombone.