A Practical Guide To Recent Advances In Multiscale Modeling And Simulation Of Biomolecules PDF Download
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| Author | : Yong Wang |
| Publisher | : |
| Total Pages | : 0 |
| Release | : 2023 |
| Genre | : SCIENCE |
| ISBN | : 9780735425255 |
Download A Practical Guide to Recent Advances in Multiscale Modeling and Simulation of Biomolecules Book in PDF, ePub and Kindle
Biomolecular modeling and simulation are becoming increasingly crucial for understanding the microscopic biological world with high time and spatial recognition. A Practical Guide to Recent Advances in Multiscale Modeling and Simulation of Biomolecules offers guidance for advanced multiscale modeling and machine learning-aided molecular simulations. The book provides reproducible, step-by-step instructions on the scripts and codes needed to complete the simulations. It offers readers tips, tricks, and troubleshooting advice for the reader's real-life challenges. Topics in this book focus on the latest developments and: Provide an overview of current methods and techniques; Serve as a tutorial and an in-depth historical record of the topic; Contain step-by-step instructions for the methods used in molecular modeling and simulation of biomolecules. A Practical Guide to Recent Advances in Multiscale Modeling and Simulation of Biomolecules is a key resource for students and researchers in biology, biophysics, biochemistry, and computational chemistry.
| Author | : Yong Wang |
| Publisher | : |
| Total Pages | : 0 |
| Release | : 2023 |
| Genre | : Biomolecules |
| ISBN | : 9780735425279 |
Download A Practical Guide to Recent Advances in Multiscale Modeling and Simulation of Biomolecules Book in PDF, ePub and Kindle
| Author | : Guohui Li |
| Publisher | : Elsevier |
| Total Pages | : 399 |
| Release | : 2024-03-28 |
| Genre | : Science |
| ISBN | : 0323959180 |
Download Chemical Theory and Multiscale Simulation in Biomolecules Book in PDF, ePub and Kindle
Chemical Theory and Multiscale Simulation in Biomolecules: From Principles to Case Studies helps readers understand what simulation is, what information modeling of biomolecules can provide, and how to compare this information with experiments. Beginning with an introduction to computational theory for modeling, the book goes on to describe how to control the conditions of modeling systems and possible strategies for time-cost savings in computation. Part Two further outlines key methods, with step-by-step guidance supporting readers in studying and practicing simulation processes. Part Three then shows how these theories are controlled and applied in practice, through examples and case studies on varied applications. This book is a practical guide for new learners, supporting them in learning and applying molecular modeling in practice, whilst also providing more experienced readers with the knowledge needed to gain a deep understanding of the theoretical background behind key methods. Presents computational theory alongside case studies to help readers understand the use of simulation in practice Includes extensive examples of different types of simulation methods and approaches to result analysis Provides an overview of the current academic frontier and research challenges, encouraging creativity and directing attention to current problems
| Author | : Valentina Tozzini |
| Publisher | : Frontiers Media SA |
| Total Pages | : 235 |
| Release | : 2020-10-27 |
| Genre | : Science |
| ISBN | : 2889661091 |
Download Multiscale Modeling From Macromolecules to Cell: Opportunities and Challenges of Biomolecular Simulations Book in PDF, ePub and Kindle
This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.
| Author | : |
| Publisher | : Elsevier |
| Total Pages | : 630 |
| Release | : 2024-07-21 |
| Genre | : Science |
| ISBN | : 0443295670 |
Download Biophysical Approaches for the Study of Membrane Structure Part B Book in PDF, ePub and Kindle
Biophysical Approaches for the Study of Membrane Structure, Part B, Volume 701 explores lipid membrane asymmetry and lateral heterogeneity. A burst of recent research has shown that bilayers whose leaflets differ in their physical properties—such as composition, phase state, or lateral stress—exhibit many fascinating new characteristics, but also pose a host of challenges related to their creation, characterization, simulation, and theoretical description. Chapters in this new release include Characterization of domain formation in complex membranes: Analyzing the bending modulus from simulations of complex membranes, The density-threshold affinity: Calculating lipid binding affinities from unbiased Coarse-Grain Molecular Dynamics simulations, and much more. Additional sections cover Uncertainty quantification for trans-membrane stresses and moments from simulation, Using molecular dynamics simulations to generate small-angle scattering curves and cryo-EM images of proteoliposomes, Binary Bilayer Simulations for Partitioning Within Membranes, Modeling Asymmetric Cell Membranes at All-atom Resolution, Multiscale remodeling of biomembranes and vesicles, Building complex membranes with Martini 3, Predicting lipid sorting in curved bilayer membranes, Simulating asymmetric membranes using P21 periodic boundary conditions, and many other interesting topics. Explore the state-of-the-art of lipid membrane asymmetry Covers experimental, theoretical, and computational techniques to create and characterize asymmetric lipid membranes Teaches how these kinds of approaches create and characterize laterally inhomogeneous membranes
| Author | : Shaofan Li |
| Publisher | : John Wiley & Sons |
| Total Pages | : 509 |
| Release | : 2013-03-19 |
| Genre | : Technology & Engineering |
| ISBN | : 1118402944 |
Download Multiscale Simulations and Mechanics of Biological Materials Book in PDF, ePub and Kindle
Multiscale Simulations and Mechanics of Biological Materials A compilation of recent developments in multiscale simulation and computational biomaterials written by leading specialists in the field Presenting the latest developments in multiscale mechanics and multiscale simulations, and offering a unique viewpoint on multiscale modelling of biological materials, this book outlines the latest developments in computational biological materials from atomistic and molecular scale simulation on DNA, proteins, and nano-particles, to meoscale soft matter modelling of cells, and to macroscale soft tissue and blood vessel, and bone simulations. Traditionally, computational biomaterials researchers come from biological chemistry and biomedical engineering, so this is probably the first edited book to present work from these talented computational mechanics researchers. The book has been written to honor Professor Wing Liu of Northwestern University, USA, who has made pioneering contributions in multiscale simulation and computational biomaterial in specific simulation of drag delivery at atomistic and molecular scale and computational cardiovascular fluid mechanics via immersed finite element method. Key features: Offers a unique interdisciplinary approach to multiscale biomaterial modelling aimed at both accessible introductory and advanced levels Presents a breadth of computational approaches for modelling biological materials across multiple length scales (molecular to whole-tissue scale), including solid and fluid based approaches A companion website for supplementary materials plus links to contributors’ websites (www.wiley.com/go/li/multiscale)
| Author | : Tamar Schlick |
| Publisher | : Springer Science & Business Media |
| Total Pages | : 669 |
| Release | : 2013-04-18 |
| Genre | : Science |
| ISBN | : 0387224645 |
Download Molecular Modeling and Simulation Book in PDF, ePub and Kindle
Very broad overview of the field intended for an interdisciplinary audience; Lively discussion of current challenges written in a colloquial style; Author is a rising star in this discipline; Suitably accessible for beginners and suitably rigorous for experts; Features extensive four-color illustrations; Appendices featuring homework assignments and reading lists complement the material in the main text
| Author | : Tamar Schlick |
| Publisher | : Royal Society of Chemistry |
| Total Pages | : 381 |
| Release | : 2012-05-24 |
| Genre | : Science |
| ISBN | : 1849735042 |
Download Innovations in Biomolecular Modeling and Simulations Book in PDF, ePub and Kindle
The chemical and biological sciences face unprecedented opportunities in the 21st century. A confluence of factors from parallel universes - advances in experimental techniques in biomolecular structure determination, progress in theoretical modeling and simulation for large biological systems, and breakthroughs in computer technology - has opened new avenues of opportunity as never before. Now, experimental data can be interpreted and further analysed by modeling, and predictions from any approach can be tested and advanced through companion methodologies and technologies. This two volume set describes innovations in biomolecular modeling and simulation, in both the algorithmic and application fronts. With contributions from experts in the field, the books describe progress and innovation in areas including: simulation algorithms for dynamics and enhanced configurational sampling, force field development, implicit solvation models, coarse-grained models, quantum-mechanical simulations, protein folding, DNA polymerase mechanisms, nucleic acid complexes and simulations, RNA structure analysis and design and other important topics in structural biology modeling. The books are aimed at graduate students and experts in structural biology and chemistry and the emphasis is on reporting innovative new approaches rather than providing comprehensive reviews on each subject.
| Author | : Guohui Li |
| Publisher | : |
| Total Pages | : 250 |
| Release | : 2013 |
| Genre | : |
| ISBN | : |
Download Recent Advances in Biomolecular Modeling and Simulation Book in PDF, ePub and Kindle
| Author | : Dimitrios I. Fotiadis |
| Publisher | : John Wiley & Sons |
| Total Pages | : 404 |
| Release | : 2023-05-05 |
| Genre | : Science |
| ISBN | : 1119517354 |
Download Multiscale Modelling in Biomedical Engineering Book in PDF, ePub and Kindle
Multiscale Modelling in Biomedical Engineering Discover how multiscale modeling can enhance patient treatment and outcomes In Multiscale Modelling in Biomedical Engineering, an accomplished team of biomedical professionals delivers a robust treatment of the foundation and background of a general computational methodology for multi-scale modeling. The authors demonstrate how this methodology can be applied to various fields of biomedicine, with a particular focus on orthopedics and cardiovascular medicine. The book begins with a description of the relationship between multiscale modeling and systems biology before moving on to proceed systematically upwards in hierarchical levels from the molecular to the cellular, tissue, and organ level. It then examines multiscale modeling applications in specific functional areas, like mechanotransduction, musculoskeletal, and cardiovascular systems. Multiscale Modelling in Biomedical Engineering offers readers experiments and exercises to illustrate and implement the concepts contained within. Readers will also benefit from the inclusion of: A thorough introduction to systems biology and multi-scale modeling, including a survey of various multi-scale methods and approaches and analyses of their application in systems biology Comprehensive explorations of biomedical imaging and nanoscale modeling at the molecular, cell, tissue, and organ levels Practical discussions of the mechanotransduction perspective, including recent progress and likely future challenges In-depth examinations of risk prediction in patients using big data analytics and data mining Perfect for undergraduate and graduate students of bioengineering, biomechanics, biomedical engineering, and medicine, Multiscale Modelling in Biomedical Engineering will also earn a place in the libraries of industry professional and researchers seeking a one-stop reference to the basic engineering principles of biological systems.
