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An Introduction to Variational Autoencoders

An Introduction to Variational Autoencoders
Author: Diederik P. Kingma
Publisher:
Total Pages: 102
Release: 2019-11-12
Genre: Computers
ISBN: 9781680836226

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An Introduction to Variational Autoencoders provides a quick summary for the of a topic that has become an important tool in modern-day deep learning techniques.


Spatio-temporal Dynamics of Human FMRI Resting Rate

Spatio-temporal Dynamics of Human FMRI Resting Rate
Author: Katharina Glomb
Publisher:
Total Pages: 107
Release: 2016
Genre:
ISBN:

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Spontaneous brain activity, measured under the absence of any overt task, has been investigated under the label of "resting state" for about 20 years with rising interest. While it was known since the beginnings of modern electrophysiology that the brain exhibits spontaneous fluctuations also during rest, the discovery, in 1995, that these fluctuations possess a robust spatio-temporal structure had a profound impact on how we understand and investigate brain activity. In this dissertation, we characterize the spatio-temporal dynamics of resting state on a macroscopic level using fMRI recordings from humans and combining novel data analysis tools with theoretical models on the level of the whole brain. We demonstrate the presence of common patterns of functional connectivity, known as resting state networks (RSNs), that evolve in time in both empirical and model data. We show that spontaneous fluctuations and their statistics are determined by the structure of the brain network and its dynamics.


Magnetoencephalography

Magnetoencephalography
Author: Selma Supek
Publisher: Springer
Total Pages: 999
Release: 2014-08-07
Genre: Technology & Engineering
ISBN: 3642330452

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Magnetoencephalography (MEG) is an invaluable functional brain imaging technique that provides direct, real-time monitoring of neuronal activity necessary for gaining insight into dynamic cortical networks. Our intentions with this book are to cover the richness and transdisciplinary nature of the MEG field, make it more accessible to newcomers and experienced researchers and to stimulate growth in the MEG area. The book presents a comprehensive overview of MEG basics and the latest developments in methodological, empirical and clinical research, directed toward master and doctoral students, as well as researchers. There are three levels of contributions: 1) tutorials on instrumentation, measurements, modeling, and experimental design; 2) topical reviews providing extensive coverage of relevant research topics; and 3) short contributions on open, challenging issues, future developments and novel applications. The topics range from neuromagnetic measurements, signal processing and source localization techniques to dynamic functional networks underlying perception and cognition in both health and disease. Topical reviews cover, among others: development on SQUID-based and novel sensors, multi-modal integration (low field MRI and MEG; EEG and fMRI), Bayesian approaches to multi-modal integration, direct neuronal imaging, novel noise reduction methods, source-space functional analysis, decoding of brain states, dynamic brain connectivity, sensory-motor integration, MEG studies on perception and cognition, thalamocortical oscillations, fetal and neonatal MEG, pediatric MEG studies, cognitive development, clinical applications of MEG in epilepsy, pre-surgical mapping, stroke, schizophrenia, stuttering, traumatic brain injury, post-traumatic stress disorder, depression, autism, aging and neurodegeneration, MEG applications in cognitive neuropharmacology and an overview of the major open-source analysis tools.


Origins of the Resting-State fMRI Signal

Origins of the Resting-State fMRI Signal
Author: Jean Chen
Publisher: Frontiers Media SA
Total Pages: 188
Release: 2020-12-28
Genre: Science
ISBN: 2889662853

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This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.


Toward Improved Characterization of Brain Network Temporal Properties with Functional Magnetic Resonance Imaging

Toward Improved Characterization of Brain Network Temporal Properties with Functional Magnetic Resonance Imaging
Author: Catherine Elizabeth Chang
Publisher: Stanford University
Total Pages: 237
Release: 2011
Genre:
ISBN:

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Functional magnetic resonance imaging (fMRI) based on blood-oxygen level dependent (BOLD) contrast is a powerful technique for non-invasive measurement of brain activity. Recent fMRI studies have revealed that the spontaneous BOLD fluctuations of the human brain organize into distributed, temporally-coherent networks ("resting-state networks"; RSNs). Examination of RSNs has yielded valuable insight into neural organization and development, and demonstrates potential as a biomarker for conditions such as Alzheimer's disease and depression. However, the accuracy by which the spatio-temporal properties of RSNs can be delineated using fMRI is compromised by the presence of physiological (cardiac and respiratory) noise and vascular hemodynamic variability. Further, our present understanding of how RSNs may interact and support cognitive function has been limited by the fact that the vast majority of studies to-date analyze RSNs in a manner that assumes temporal stationarity. Here, we describe efforts to correct for non-neural physiological influences on the BOLD signal, as well as investigations into the dynamic character of resting-state network connectivity. It is found that low-frequency variations in cardiac and respiratory processes account for significant noise across widespread gray matter regions, and that a constrained deconvolution approach may prove effective for modeling and reducing their effects. Application of the proposed noise-reduction procedure is observed to yield negative correlations between the spontaneous fluctuations of two major RSNs. The relationship between respiratory volume changes and the BOLD signal is further examined by simultaneously monitoring and comparing chest expansion data, end-tidal gas concentrations, and spontaneous BOLD fluctuations. The use of a breath-holding task is proposed for quantifying regional differences in BOLD signal timing that arise from local vasomotor response delays; such non-neural timing delays are found to impact inferences of resting-state connectivity and causality. Finally, a preliminary analysis of non-stationary connectivity between RSNs is performed using wavelet and sliding-window approaches, and it is observed that interactions between networks may reconfigure on time-scales of seconds to minutes.


Selected Papers on Language and the Brain

Selected Papers on Language and the Brain
Author: N. Geschwind
Publisher: Springer Science & Business Media
Total Pages: 567
Release: 2012-12-06
Genre: Science
ISBN: 9401020930

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Philosophers of science work not only with the methods of the sciences but with their contents as well. Substantive issues concerning the relation between mind and matter, between the material basis and the functions of cognition, have been central within the entire history of philosophy. We recall such philosophers as Aristotle, Descartes, the early Kant, Ernst Mach, and the early William James as directly inquiring of the organs and structures of thinking. Science and its philosophical self-criticism are especially and deeply united in the effort to understand the biological brain and human behavior, and so it requires no apology to include this collection of clinical studies among Boston Studies in the Philosophy of Science. The work of Dr. Norman Geschwind, well represented in this selection, explores the relation between structure and function, between the anatomy of the brain and the 'higher' behavior of men and women. As a clinical neurologist, Geschwind was led to these studies particularly by his in terest in those pathologies which have to do with human perception and language. His research into the anatomical substrates of specific dis orders-and strikingly the aphasias -present a fascinating and provocative examination of fundamental questions which will concern not neurologists alone but also psychologists, physicians, linguists, speech pathologists, educators, anthropologists, historians of medicine, and philosophers, among others, namely all those interested in the characteristic modes of human activity, in speech, in perception, and in the learning process generally.


Neuroscience in the 21st Century

Neuroscience in the 21st Century
Author: Donald W. Pfaff
Publisher: Springer
Total Pages: 0
Release: 2016-10-27
Genre: Medical
ISBN: 9781493934737

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Edited and authored by a wealth of international experts in neuroscience and related disciplines, this key new resource aims to offer medical students and graduate researchers around the world a comprehensive introduction and overview of modern neuroscience. Neuroscience research is certain to prove a vital element in combating mental illness in its various incarnations, a strategic battleground in the future of medicine, as the prevalence of mental disorders is becoming better understood each year. Hundreds of millions of people worldwide are affected by mental, behavioral, neurological and substance use disorders. The World Health Organization estimated in 2002 that 154 million people globally suffer from depression and 25 million people from schizophrenia; 91 million people are affected by alcohol use disorders and 15 million by drug use disorders. A more recent WHO report shows that 50 million people suffer from epilepsy and 24 million from Alzheimer’s and other dementias. Because neuroscience takes the etiology of disease—the complex interplay between biological, psychological, and sociocultural factors—as its object of inquiry, it is increasingly valuable in understanding an array of medical conditions. A recent report by the United States’ Surgeon General cites several such diseases: schizophrenia, bipolar disorder, early-onset depression, autism, attention deficit/ hyperactivity disorder, anorexia nervosa, and panic disorder, among many others. Not only is this volume a boon to those wishing to understand the future of neuroscience, it also aims to encourage the initiation of neuroscience programs in developing countries, featuring as it does an appendix full of advice on how to develop such programs. With broad coverage of both basic science and clinical issues, comprising around 150 chapters from a diversity of international authors and including complementary video components, Neuroscience in the 21st Century in its second edition serves as a comprehensive resource to students and researchers alike.


Sleep and Anesthesia

Sleep and Anesthesia
Author: Axel Hutt
Publisher: Springer Science & Business Media
Total Pages: 268
Release: 2011-07-12
Genre: Medical
ISBN: 1461401739

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Sleep and anesthesia resemble in many ways at a first glance. The most prominent common feature of course is the loss of consciousness, i.e. the loss of awareness of external stimuli. However a closer look at the loss of consciousness reveals already a difference between sleep and anesthesia: anesthesia is induced by an anesthetic drug whereas we may fall asleep without external cause. Other questions may arise about the difference of the two effects: do we dream during surgery under anesthesia, do we feel pain during sleep? Essentially, we may ask: what is common and what are the differences between sleep and anesthesia? To answer these questions, we may take a look at the neural origin of both effects and the involved physiological pathways. In which way do they resemble? Moreover, we ask what are the detailed features of normal sleep and general anesthesia as applied during surgery and which features exist in both phenomena? If yes in which way? To receive answers to these questions, it is necessary to consider several experimental techniques that reveal underlying neural mechanisms of sleep and anesthesia. Moreover, theoretical models of neural activity may model both phenomena and comes up with predictions or even theories on the underlying mechanisms. Such models may attack several different description levels, from the microscopic level of single neurons to the macroscopic level of neural populations. Such models may give deeper insight into the phenomena if their assumptions are based on experimental findings and their predictions can be compared to experimental results. This comparison step is essential for valuable theoretical models. The book is motivated by two successful workshops on anesthesia and sleep organized during the Computational Neuroscience Conferences in Toronto in 2007 and in Berlin 2009. It aims to cover all the previous aspects with a focus on the link to experimental findings. It elucidates important issues in theoretical models that at the same time reflect some current major research interests. Moreover it considers some diverse issues which are very important to get an overview of the fields. For instance, the book discusses not only neural activity in the brain but also the effects of general anesthesia on the cardio-vascular system and the spinal cord in the context of analgesia. In addition, it considers different experimental techniques on various spatial scales, such as fMRI and EEG-experiments on the macroscopic scale and single neuron and LFP-measurements on the microscopic scale. In total all book chapters reveal aspects of the neural correlates of sleep and anesthesia motivated by experimental data. This focus on the neural mechanism in the light of experimental data is the common feature of the topics and the chapters. In addition, the book aims to clarify the shared physiological mechanisms of both phenomena, but also reveal their physiological differences.


Advances in Resting-State Functional MRI-

Advances in Resting-State Functional MRI-
Author: Jean Chen
Publisher: Elsevier
Total Pages: 382
Release: 2023-07-03
Genre: Psychology
ISBN: 0323985459

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Advances in Resting-State Functional MRI: Methods, Interpretation, and Applications gives readers with basic neuroimaging experience an up-to-date and in-depth understanding of the methods, opportunities, and challenges in rs-fMRI. The book covers current knowledge gaps in rs-fMRI, including "what are biologically plausible brain networks," "how to tell what part is noise," "how to perform quality assurance on the data," "what are the spatial and temporal limits of our ability to resolve FC," and "how to best identify network features related to individual differences or disease state". This book is an ideal reference for neuroscientists, computational neuroscientists, psychologists, biomedical engineers, physicists and medical physicists. Both new and more advanced researchers alike will be able to discover new information distilled from the past decade of research to become well-versed in rs-fMRI-related topics. Presents the first book to explain the latest methods, opportunities and challenges of Resting-state Functional MRI Edited and authored by leading researchers in fMRI Includes neuroscientific and clinical applications