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Simulating Hamiltonian Dynamics

Simulating Hamiltonian Dynamics
Author: Benedict Leimkuhler
Publisher: Cambridge University Press
Total Pages: 464
Release: 2004
Genre: Mathematics
ISBN: 9780521772907

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Geometric integrators are time-stepping methods, designed such that they exactly satisfy conservation laws, symmetries or symplectic properties of a system of differential equations. In this book the authors outline the principles of geometric integration and demonstrate how they can be applied to provide efficient numerical methods for simulating conservative models. Beginning from basic principles and continuing with discussions regarding the advantageous properties of such schemes, the book introduces methods for the N-body problem, systems with holonomic constraints, and rigid bodies. More advanced topics treated include high-order and variable stepsize methods, schemes for treating problems involving multiple time-scales, and applications to molecular dynamics and partial differential equations. The emphasis is on providing a unified theoretical framework as well as a practical guide for users. The inclusion of examples, background material and exercises enhance the usefulness of the book for self-instruction or as a text for a graduate course on the subject.


Simulating Hamiltonian Dynamics

Simulating Hamiltonian Dynamics
Author: B. Leimkuhler
Publisher:
Total Pages: 379
Release: 2004
Genre: Hamiltonian systems
ISBN: 9780511298004

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The Genesis of Simulation in Dynamics

The Genesis of Simulation in Dynamics
Author: Thomas P. Weissert
Publisher: Springer Science & Business Media
Total Pages: 184
Release: 2012-12-06
Genre: Science
ISBN: 1461219566

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An introduction to certain aspects of developments in the modern theory of dynamics and simulation for a wide audience of scientifically literate readers. Unlike general texts on chaos theory and dynamical systems theory, this book follows the work on a specific problem at the very beginning of the modern era of dynamics, from its inception in 1954 through the early 1970s. It discusses such problems as the nonlinear oscillator simulation, the seminal discoveries at MIT in the early 1950s, the mathematical rediscovery of solitons in the late 1950s and the general problems of computability. In following these developments, the initial development of many of the now standard techniques of nonlinear modelling and numerical simulation are seen. No other text focuses so tightly and covers so completely one specific, pernicious problem at the heart of dynamics.


Global Formulations of Lagrangian and Hamiltonian Dynamics on Manifolds

Global Formulations of Lagrangian and Hamiltonian Dynamics on Manifolds
Author: Taeyoung Lee
Publisher: Springer
Total Pages: 539
Release: 2017-08-14
Genre: Mathematics
ISBN: 3319569538

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This book provides an accessible introduction to the variational formulation of Lagrangian and Hamiltonian mechanics, with a novel emphasis on global descriptions of the dynamics, which is a significant conceptual departure from more traditional approaches based on the use of local coordinates on the configuration manifold. In particular, we introduce a general methodology for obtaining globally valid equations of motion on configuration manifolds that are Lie groups, homogeneous spaces, and embedded manifolds, thereby avoiding the difficulties associated with coordinate singularities. The material is presented in an approachable fashion by considering concrete configuration manifolds of increasing complexity, which then motivates and naturally leads to the more general formulation that follows. Understanding of the material is enhanced by numerous in-depth examples throughout the book, culminating in non-trivial applications involving multi-body systems. This book is written for a general audience of mathematicians, engineers, and physicists with a basic knowledge of mechanics. Some basic background in differential geometry is helpful, but not essential, as the relevant concepts are introduced in the book, thereby making the material accessible to a broad audience, and suitable for either self-study or as the basis for a graduate course in applied mathematics, engineering, or physics.


Simulating the Physical World

Simulating the Physical World
Author: Herman J. C. Berendsen
Publisher: Cambridge University Press
Total Pages:
Release: 2007-07-12
Genre: Technology & Engineering
ISBN: 1139461710

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The simulation of physical systems requires a simplified, hierarchical approach which models each level from the atomistic to the macroscopic scale. From quantum mechanics to fluid dynamics, this book systematically treats the broad scope of computer modeling and simulations, describing the fundamental theory behind each level of approximation. Berendsen evaluates each stage in relation to its applications giving the reader insight into the possibilities and limitations of the models. Practical guidance for applications and sample programs in Python are provided. With a strong emphasis on molecular models in chemistry and biochemistry, this 2007 book will be suitable for advanced undergraduate and graduate courses on molecular modeling and simulation within physics, biophysics, physical chemistry and materials science. It will also be a useful reference to all those working in the field. Additional resources for this title including solutions for instructors and programs are available online at www.cambridge.org/9780521835275.


Molecular Dynamics Simulation

Molecular Dynamics Simulation
Author: Giovanni Ciccotti
Publisher: MDPI
Total Pages: 627
Release: 2018-10-08
Genre: Electronic book
ISBN: 3906980650

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Printed Edition of the Special Issue Published in Entropy


Numerical Simulation in Molecular Dynamics

Numerical Simulation in Molecular Dynamics
Author: Michael Griebel
Publisher: Springer Science & Business Media
Total Pages: 472
Release: 2007-08-16
Genre: Science
ISBN: 3540680950

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This book details the necessary numerical methods, the theoretical background and foundations and the techniques involved in creating computer particle models, including linked-cell method, SPME-method, tree codes, amd multipol technique. It illustrates modeling, discretization, algorithms and their parallel implementation with MPI on computer systems with distributed memory. The text offers step-by-step explanations of numerical simulation, providing illustrative code examples. With the description of the algorithms and the presentation of the results of various simulations from fields such as material science, nanotechnology, biochemistry and astrophysics, the reader of this book will learn how to write programs capable of running successful experiments for molecular dynamics.


Essentials of Hamiltonian Dynamics

Essentials of Hamiltonian Dynamics
Author: John H. Lowenstein
Publisher: Cambridge University Press
Total Pages: 203
Release: 2012-01-19
Genre: Mathematics
ISBN: 1107005205

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Concise and pedagogical textbook that covers all the topics necessary for a graduate-level course in dynamics based on Hamiltonian methods.


Molecular Quantum Dynamics

Molecular Quantum Dynamics
Author: Fabien Gatti
Publisher: Springer Science & Business Media
Total Pages: 281
Release: 2014-04-09
Genre: Science
ISBN: 3642452906

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This book focuses on current applications of molecular quantum dynamics. Examples from all main subjects in the field, presented by the internationally renowned experts, illustrate the importance of the domain. Recent success in helping to understand experimental observations in fields like heterogeneous catalysis, photochemistry, reactive scattering, optical spectroscopy, or femto- and attosecond chemistry and spectroscopy underline that nuclear quantum mechanical effects affect many areas of chemical and physical research. In contrast to standard quantum chemistry calculations, where the nuclei are treated classically, molecular quantum dynamics can cover quantum mechanical effects in their motion. Many examples, ranging from fundamental to applied problems, are known today that are impacted by nuclear quantum mechanical effects, including phenomena like tunneling, zero point energy effects, or non-adiabatic transitions. Being important to correctly understand many observations in chemical, organic and biological systems, or for the understanding of molecular spectroscopy, the range of applications covered in this book comprises broad areas of science: from astrophysics and the physics and chemistry of the atmosphere, over elementary processes in chemistry, to biological processes (such as the first steps of photosynthesis or vision). Nevertheless, many researchers refrain from entering this domain. The book "Molecular Quantum Dynamics" offers them an accessible introduction. Although the calculation of large systems still presents a challenge - despite the considerable power of modern computers - new strategies have been developed to extend the studies to systems of increasing size. Such strategies are presented after a brief overview of the historical background. Strong emphasis is put on an educational presentation of the fundamental concepts, so that the reader can inform himself about the most important concepts, like eigenstates, wave packets, quantum mechanical resonances, entanglement, etc. The chosen examples highlight that high-level experiments and theory need to work closely together. This book thus is a must-read both for researchers working experimentally or theoretically in the concerned fields, and generally for anyone interested in the exciting world of molecular quantum dynamics.


Complex Hamiltonian Dynamics

Complex Hamiltonian Dynamics
Author: Tassos Bountis
Publisher: Springer Science & Business Media
Total Pages: 277
Release: 2012-04-03
Genre: Science
ISBN: 364227305X

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This book introduces and explores modern developments in the well established field of Hamiltonian dynamical systems. It focuses on high degree-of-freedom systems and the transitional regimes between regular and chaotic motion. The role of nonlinear normal modes is highlighted and the importance of low-dimensional tori in the resolution of the famous FPU paradox is emphasized. Novel powerful numerical methods are used to study localization phenomena and distinguish order from strongly and weakly chaotic regimes. The emerging hierarchy of complex structures in such regimes gives rise to particularly long-lived patterns and phenomena called quasi-stationary states, which are explored in particular in the concrete setting of one-dimensional Hamiltonian lattices and physical applications in condensed matter systems. The self-contained and pedagogical approach is blended with a unique balance between mathematical rigor, physics insights and concrete applications. End of chapter exercises and (more demanding) research oriented problems provide many opportunities to deepen the reader’s insights into specific aspects of the subject matter. Addressing a broad audience of graduate students, theoretical physicists and applied mathematicians, this text combines the benefits of a reference work with those of a self-study guide for newcomers to the field.