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Semi-parametric Survival Analysis Via Dirichlet Process Mixtures of the First Hitting Time Model

Semi-parametric Survival Analysis Via Dirichlet Process Mixtures of the First Hitting Time Model
Author: Jonathan A. Race
Publisher:
Total Pages: 149
Release: 2019
Genre: Survival analysis (Biometry)
ISBN:

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Time-to-event data often violate the proportional hazards assumption inherent in the popular Cox regression model. Such violations are especially common in the sphere of biological and medical data where latent heterogeneity due to unmeasured covariates or time varying effects are common. A variety of parametric survival models have been proposed which make more appropriate assumptions on the hazard function, at least for certain applications. One such model is derived from the First Hitting Time (FHT) paradigm which assumes that a subject's event time is determined by a latent stochastic process reaching a threshold value. Several random effects specifications of the FHT model have also been proposed which allow for better modeling of data with unmeasured covariates. While often appropriate, these methods often display limited flexibility due to their inability to model a wide range of heterogeneities. To address this issue, we propose two Bayesian models which loosen assumptions on the mixing distribution inherent in the random effects FHT models currently in use. The first proposed model is ideally suited for standard regression analyses. The second model is designed for use in clinical trials where survival is the outcome of interest. We demonstrate via simulation study that the proposed models greatly improve both survival and parameter estimation in the presence of latent heterogeneity. We also apply the proposed methodologies to data from a toxicology/carcinogenicity study which exhibits nonproportional hazards and contrast the results with competing methods.


Survival Analysis: State of the Art

Survival Analysis: State of the Art
Author: John P. Klein
Publisher: Springer Science & Business Media
Total Pages: 446
Release: 2013-03-09
Genre: Mathematics
ISBN: 9401579830

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Survival analysis is a highly active area of research with applications spanning the physical, engineering, biological, and social sciences. In addition to statisticians and biostatisticians, researchers in this area include epidemiologists, reliability engineers, demographers and economists. The economists survival analysis by the name of duration analysis and the analysis of transition data. We attempted to bring together leading researchers, with a common interest in developing methodology in survival analysis, at the NATO Advanced Research Workshop. The research works collected in this volume are based on the presentations at the Workshop. Analysis of survival experiments is complicated by issues of censoring, where only partial observation of an individual's life length is available and left truncation, where individuals enter the study group if their life lengths exceed a given threshold time. Application of the theory of counting processes to survival analysis, as developed by the Scandinavian School, has allowed for substantial advances in the procedures for analyzing such experiments. The increased use of computer intensive solutions to inference problems in survival analysis~ in both the classical and Bayesian settings, is also evident throughout the volume. Several areas of research have received special attention in the volume.


Survival Analysis Using S

Survival Analysis Using S
Author: Mara Tableman
Publisher: CRC Press
Total Pages: 277
Release: 2003-07-28
Genre: Mathematics
ISBN: 0203501411

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Survival Analysis Using S: Analysis of Time-to-Event Data is designed as a text for a one-semester or one-quarter course in survival analysis for upper-level or graduate students in statistics, biostatistics, and epidemiology. Prerequisites are a standard pre-calculus first course in probability and statistics, and a course in applied linear regression models. No prior knowledge of S or R is assumed. A wide choice of exercises is included, some intended for more advanced students with a first course in mathematical statistics. The authors emphasize parametric log-linear models, while also detailing nonparametric procedures along with model building and data diagnostics. Medical and public health researchers will find the discussion of cut point analysis with bootstrap validation, competing risks and the cumulative incidence estimator, and the analysis of left-truncated and right-censored data invaluable. The bootstrap procedure checks robustness of cut point analysis and determines cut point(s). In a chapter written by Stephen Portnoy, censored regression quantiles - a new nonparametric regression methodology (2003) - is developed to identify important forms of population heterogeneity and to detect departures from traditional Cox models. By generalizing the Kaplan-Meier estimator to regression models for conditional quantiles, this methods provides a valuable complement to traditional Cox proportional hazards approaches.


Handbook of Survival Analysis

Handbook of Survival Analysis
Author: John P. Klein
Publisher: CRC Press
Total Pages: 635
Release: 2016-04-19
Genre: Mathematics
ISBN: 146655567X

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Handbook of Survival Analysis presents modern techniques and research problems in lifetime data analysis. This area of statistics deals with time-to-event data that is complicated by censoring and the dynamic nature of events occurring in time. With chapters written by leading researchers in the field, the handbook focuses on advances in survival analysis techniques, covering classical and Bayesian approaches. It gives a complete overview of the current status of survival analysis and should inspire further research in the field. Accessible to a wide range of readers, the book provides: An introduction to various areas in survival analysis for graduate students and novices A reference to modern investigations into survival analysis for more established researchers A text or supplement for a second or advanced course in survival analysis A useful guide to statistical methods for analyzing survival data experiments for practicing statisticians


Child Mortality Using Bayesian Semi-Parametric Discrete-Time Survival Model

Child Mortality Using Bayesian Semi-Parametric Discrete-Time Survival Model
Author: Tesfaye Abera Jimma
Publisher:
Total Pages: 9
Release: 2016
Genre:
ISBN:

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The Bayesian Approach offers the viable and rigorous solution, though there is also the added benefit of providing much-needed uncertainty and probability assessments in non-linear and non-Gaussian situations in a valid and rigorous way. Mortality and its various determinants have been traditionally studied in a regression modeling framework. Initial studies mostly used the usual linear regression models which, however, are not appropriate in situations where the mortality information is given by a binary indicator of death or alive. Binary regression models (logit and probit) are, therefore, a logical alternatives. There are, however, problems, with logit and probit models, namely, that they do not take into consideration the information on the survival time. Hence, most studies now utilize the survival analysis techniques. Recently, Fahrmeir and co-researchers at the LMU Munich have proposed a Bayesian Geo-Additive modeling framework which encompasses most of the known regression models and improves upon their shortcomings. The proposed model is also called Bayesian semi-parametric structured regression model.


Survival Models and Data Analysis

Survival Models and Data Analysis
Author: Regina C. Elandt-Johnson
Publisher: John Wiley & Sons
Total Pages: 480
Release: 1999-02-22
Genre: Mathematics
ISBN: 9780471349921

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Survival analysis deals with the distribution of life times, essentially the times from an initiating event such as birth or the start of a job to some terminal event such as death or pension. This book, originally published in 1980, surveys and analyzes methods that use survival measurements and concepts, and helps readers apply the appropriate method for a given situation. Four broad sections cover introductions to data, univariate survival function, multiple-failure data, and advanced topics.


Shared Frailty Survival Analysis Using Semiparametric Bayesian Method

Shared Frailty Survival Analysis Using Semiparametric Bayesian Method
Author: Prof Shaban
Publisher:
Total Pages: 0
Release: 2015
Genre:
ISBN:

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In survival data analysis, the proportional hazard model was introduced by Cox (1972) in order to estimate the effects of different covariates influencing the time-to-event data. The proportional hazard model has been used extensively in biomedicine, reliability engineering and, recently, interest in its application in different areas of knowledge has increased. However, proportional hazard model makes a number of assumptions, which may be violated. The object of this article is to present a Bayesian analysis for survival models with frailty under additive framework for the hazard function in contrast to proportional hazard model. Frailty models in survival analysis deal with the unobserved heterogeneity among subjects. Gibbs sampling technique is used to assess the posterior quantities of interest. An illustrative analysis within the context of survival time data is given.


Survival Analysis

Survival Analysis
Author: David G. Kleinbaum
Publisher: Springer
Total Pages: 597
Release: 2006-01-02
Genre: Mathematics
ISBN: 0387291504

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An excellent introduction for all those coming to the subject for the first time. New material has been added to the second edition and the original six chapters have been modified. The previous edition sold 9500 copies world wide since its release in 1996. Based on numerous courses given by the author to students and researchers in the health sciences and is written with such readers in mind. Provides a "user-friendly" layout and includes numerous illustrations and exercises. Written in such a way so as to enable readers learn directly without the assistance of a classroom instructor. Throughout, there is an emphasis on presenting each new topic backed by real examples of a survival analysis investigation, followed up with thorough analyses of real data sets.


Introducing Survival and Event History Analysis

Introducing Survival and Event History Analysis
Author: Melinda Mills
Publisher: SAGE
Total Pages: 301
Release: 2011-01-19
Genre: Social Science
ISBN: 1848601026

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This book is an accessible, practical and comprehensive guide for researchers from multiple disciplines including biomedical, epidemiology, engineering and the social sciences. Written for accessibility, this book will appeal to students and researchers who want to understand the basics of survival and event history analysis and apply these methods without getting entangled in mathematical and theoretical technicalities. Inside, readers are offered a blueprint for their entire research project from data preparation to model selection and diagnostics. Engaging, easy to read, functional and packed with enlightening examples, ‘hands-on’ exercises, conversations with key scholars and resources for both students and instructors, this text allows researchers to quickly master advanced statistical techniques. It is written from the perspective of the ‘user’, making it suitable as both a self-learning tool and graduate-level textbook. Also included are up-to-date innovations in the field, including advancements in the assessment of model fit, unobserved heterogeneity, recurrent events and multilevel event history models. Practical instructions are also included for using the statistical programs of R, STATA and SPSS, enabling readers to replicate the examples described in the text.


Analysis of Survival Data

Analysis of Survival Data
Author: D.R. Cox
Publisher: CRC Press
Total Pages: 216
Release: 1984-06-01
Genre: Mathematics
ISBN: 9780412244902

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This monograph contains many ideas on the analysis of survival data to present a comprehensive account of the field. The value of survival analysis is not confined to medical statistics, where the benefit of the analysis of data on such factors as life expectancy and duration of periods of freedom from symptoms of a disease as related to a treatment applied individual histories and so on, is obvious. The techniques also find important applications in industrial life testing and a range of subjects from physics to econometrics. In the eleven chapters of the book the methods and applications of are discussed and illustrated by examples.